Xanthomonas citri pv. fuscans: XFF4834R_chr37160
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Entry
XFF4834R_chr37160 CDS
T03094
Symbol
rpoH
Name
(GenBank) RNA polymerase, sigma 32 (sigma H) factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
xfu
Xanthomonas citri pv. fuscans
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xfu03021
]
XFF4834R_chr37160 (rpoH)
Transcription machinery [BR:
xfu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XFF4834R_chr37160 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Phage_terminase
IF2_N
HTH_11
KORA
HTH_10
UCR_14kD
HTH_3
HTH_25
Motif
Other DBs
NCBI-ProteinID:
CDF63139
UniProt:
A0AB34Q6A7
LinkDB
All DBs
Position
complement(4298412..4299287)
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AA seq
291 aa
AA seq
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MNQTTSTALVANNLPIPSALGSLDAYIGAVHQIPVLSVDEEQDLARRFRDELDLDAAREL
VHSHLRFVVHVARGYNGYGLPLGDLIQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIRAEM
HEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWLNASEVTAVAKDLNVSEREVMEMES
RLSGRDIGFDASSDEDDDHGPPSPVSYLVANEEDPSQAYERHDSEDNQLQLLREGMAGLD
ARSRDIVKRRWLDSDSKVTLQELADEYGVSAERIRQIEANALKKMKALFVA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagactacttcgactgccctcgtggcaaacaatctcccgattcccagtgcgctc
ggttcgctggacgcctacatcggtgccgtgcaccagatcccggtgctgtcggtcgatgag
gagcaggatctggcccgtcgcttccgcgacgagctggatctggacgccgcgcgcgaactg
gtccattcccacctgcgtttcgtggtgcacgtggcccgcggctacaacggctacggcctg
ccgctgggcgacctgatccaggaaggcaacatcggcctgatgaaggcggtcaagcgtttc
gacccggacatgggcgtgcgcctggtcagcttcgcggtgcactggatccgtgccgagatg
cacgagttcatcctgaagaactggcgcatcgtcaaggtcgccacgaccaaggcgcagcgc
aagctgttcttcaacctgcgcaagtccaagacccgtctgggctggctcaatgcgtcggaa
gtgactgcggttgccaaggacctgaacgtctccgagcgtgaagtgatggagatggagtcg
cgcctgtccggtcgcgatatcggtttcgacgcgtcgtcggacgaagacgacgatcacggc
ccgccgtcgccggtgagctacctggtcgccaatgaagaagatccttcgcaggcatacgag
cgtcacgacagcgaagacaaccagctgcagctgctgcgcgaaggcatggctggcctggac
gcgcgctcgcgcgacatcgtcaagcgccgttggctggattccgattccaaggtgacgctg
caggaactggcagacgaatacggcgtgtcggccgagcgtatccgccagatcgaagcgaat
gcgctgaagaagatgaaggcgctgttcgtcgcctga
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