Xanthomonas citri pv. fuscans: XFF4834R_chr39280
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Entry
XFF4834R_chr39280 CDS
T03094
Name
(GenBank) putative TonB-dependent transporter
KO
K02014
iron complex outermembrane recepter protein
Organism
xfu
Xanthomonas citri pv. fuscans
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xfu02000
]
XFF4834R_chr39280
Transporters [BR:
xfu02000
]
Other transporters
Pores ion channels [TC:
1
]
XFF4834R_chr39280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF4131
Motif
Other DBs
NCBI-ProteinID:
CDF63332
UniProt:
A0AB34QA62
LinkDB
All DBs
Position
complement(4524511..4526691)
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AA seq
726 aa
AA seq
DB search
MTCTQATLLSLSVAVALGCIGAARAQQTATVQATEATTLDQVLVSGRLRSLEQFTPTGSR
LNLSARETPGTLDAINAAAIEARGLRSVEKAAESLPGINTGGSPGNPATFSMRGFTDGQI
TILHNGLYLGPSNMTNRPQNTFNLQSVEVLKGPASVIYGQGAVGGAVNVTNKAPTFGPAQ
YELLLGASSYGGRVFGVGAGGGINDDWAYRADISLVSSDGYVHGADSSALNATVSLLWHP
REDISAQFSLDYAKDQPSTYFGTPLLPAAAARTPINGILRAPNGEVVDAATRRNNYNVAD
ASIDARQLWPQAYLKWKVTDAVTVQNMAYYFHADRRWINAENYTYNPQSARIERDRFFVY
HQQTLWGNQTSATFDQRIAGLKNRLVVGLDYSRLDFDRNRGFPEGDSVAVDTRGPSGAFG
ERVRRRSPTTWTNAALFFEDALDVTDKAKLVLGGRYEYLDLDRKNFGPDGGFQAASSFSR
TYRPANGRLGLVYALTPNITPYASYTTATDPAGSNIFIVNAGQDFALSKSRQAEVGVKAA
TADQRLSGTLAVYDIKRNNILALTAQDALSNIGRQTSRGFELSIDAQLTSQWSANANYAY
VDAAYAQFIDSNSGLDASGNRPTNVPTSLFNAWTSVRNVAGLPLELGASVRHVGTRYGNL
ANTLRLESYTLTGAYATYDVNSEVSLSLHADNLFNTHYVQWADVFYPGQVILGLPRTVEL
SLHARF
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgcacgcaagccacgctgctgtccttgtcggttgccgtcgcactgggctgcatc
ggcgccgcacgcgcgcagcagacagccacggtgcaagccaccgaggcgaccacgctggac
caggttctcgtgagcggccgcctgcgttcgctggagcaattcaccccgaccggcagccgg
ctcaatctgtccgcacgcgagacgcccggcacgctggatgcgatcaacgccgccgccatc
gaagcgcgcgggctgcgcagcgtggagaaggcggccgagagtttgccgggcatcaacacc
ggcggctcgccgggaaatccggcgaccttctcgatgcgcggcttcaccgacgggcagatc
accatcctgcacaacggcctgtatctggggccgtcgaacatgaccaaccggccgcagaac
accttcaacctgcaatcggtcgaagtgttgaaaggcccggcgtcggtgatctatggccag
ggcgcggtgggcggcgcggtcaatgtgaccaacaaggcgccgaccttcgggcctgcgcaa
tacgaactgctgctgggcgcgtccagctacggcggccgggtattcggcgtcggtgccggt
ggcggcatcaacgatgattgggcgtatcgcgccgacatcagcctggtgtcgtccgatggc
tatgtgcacggcgccgattccagcgcgctcaacgccaccgtgtcgctgctgtggcacccg
cgcgaagacatcagcgcgcaattttcgctggattacgcaaaagaccagccctcgacctac
ttcggcaccccgctgttgccggccgctgcggcacgcacgcccatcaacggcatcctgcgc
gcgcccaatggcgaagtggtggatgccgcgacgcgccgcaacaactacaacgtggccgat
gccagcatcgacgcgcgtcagctgtggccgcaggcctatctcaagtggaaggtcaccgat
gccgtcaccgtgcagaacatggcctattacttccatgccgatcggcgctggatcaatgcg
gagaactacacctacaacccgcagagcgcgcgcatcgagcgtgatcgcttcttcgtgtat
caccagcagacgctgtggggaaatcagactagcgcgaccttcgatcagcgcatcgcaggg
ctgaagaaccggcttgtggtggggctggattacagtcgcctggacttcgacaggaaccgc
ggcttccccgagggcgacagcgtggcggtggacacgcgcgggccaagcggcgcgttcggc
gaacgcgtgcgccgacgcagccccaccacctggaccaatgccgcgctgtttttcgaagat
gcgctggatgtcaccgacaaggcaaaactggtactcggcgggcgctacgaatatctcgat
ctggatcgcaagaacttcggtccggatggtgggtttcaggcggcatcgagtttctcgcgt
acctaccgcccggccaatggccgcctcggtctggtctacgcgctcaccccgaacatcacc
ccgtacgcgtcctacaccaccgccaccgatccggctggctccaatatcttcatcgtcaat
gcggggcaggactttgcattgagcaaatcgcggcaggcggaagtcggcgtcaaggccgcc
acggccgatcaacgcctgagcggcacgctggcggtctatgacatcaaacgcaacaacatc
ctggcgctgacggcccaggacgcgctcagcaacatcgggcggcaaacctcgcgcggattc
gaactcagcatcgatgcgcagctgacctcgcagtggagtgccaatgccaactacgcctac
gtcgatgccgcgtacgcgcagttcatcgacagcaatagcggcctggatgcctccggcaac
cgccccaccaatgtccccacgtcgctgttcaatgcctggaccagcgtgagaaacgtcgcc
ggcctgccgctggagctgggcgcctcggtgcgccatgtcggcacgcgctacggcaacctc
gccaatacgctgcgtctggagtcgtacaccttgaccggtgcgtacgccacctacgatgtg
aattccgaggtgtcgctatcgctgcacgcggacaatctgttcaacacgcactacgtgcaa
tgggcggacgtgttctatcccgggcaggtcatcctgggcttgccacggacggtggagctg
agcctgcatgcacgtttctga
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