Xanthomonas citri pv. fuscans: XFF4834R_chr39790
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Entry
XFF4834R_chr39790 CDS
T03094
Symbol
polA
Name
(GenBank) probable DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu03030
DNA replication
xfu03410
Base excision repair
xfu03420
Nucleotide excision repair
xfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XFF4834R_chr39790 (polA)
03410 Base excision repair
XFF4834R_chr39790 (polA)
03420 Nucleotide excision repair
XFF4834R_chr39790 (polA)
03440 Homologous recombination
XFF4834R_chr39790 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xfu03032
]
XFF4834R_chr39790 (polA)
03400 DNA repair and recombination proteins [BR:
xfu03400
]
XFF4834R_chr39790 (polA)
Enzymes [BR:
xfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XFF4834R_chr39790 (polA)
DNA replication proteins [BR:
xfu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
XFF4834R_chr39790 (polA)
DNA repair and recombination proteins [BR:
xfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
XFF4834R_chr39790 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XFF4834R_chr39790 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Terminase_6
Glyco_hydro_32C
Motif
Other DBs
NCBI-ProteinID:
CDF63381
UniProt:
A0AB34Q7A9
LinkDB
All DBs
Position
complement(4581890..4584694)
Genome browser
AA seq
934 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERPAYIAFVVDAPG
KTFRDDLYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQGA
ADGLAVTISTGDKDFAQLVRPGIELVNTMSGSRMDSDAAVVAKFGVRPEQIVDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYDSLDGVIANADKIKGKIGDNLRAALPRLPLNRALVTI
KTDVTLASGPRALDLREPNAEALAVLYARYGFTQALRELGGAAAAQAGLLAEPVALGAAA
AAARTEPGRARGTGFVSGPVNAAVDVDPSLSAPGQYDTILTQEQLDSWIARLRAAGQFAF
DTETDSLDPLQADLIGLSVAAEPGQAAYLPFGHNFPGAPVQLDRTQALAQLAPLLTDPAV
RKLGQHGKYDLHVMRRHGVELAGYADDTLLESFVLNSGSARHDMDSLAKRYLGYDTVKYE
DVCGKGAKQIPFAQISLEDATRYAAEDADITLRLHRVLGPRLTSEPGLERVYRDIEMPLV
DVLARIEANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFDEL
KLPAVVKTPKGQPSTNEEALEAIADQHELPRVILEYRGLTKLRSTYTDKLPEMIHPQSGR
VHTSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPPGRKLIACDYSQIELRIM
AHLSGDPGLVGAFESGADVHRATAAEVFGRTIDTVSADERRAAKAINFGLMYGMSAFGLA
RQLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQG
QRAGAERAAINAPMQGTAADIIKRAMVNVDGWIADHAQRAKMILQVHDELVFEADVDFVD
TLLSEVTTRMAGAAELRVPLVVDSGVGDNWDQAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgacgggtccagttacctgtatcgcgcgttccacgcgctt
ccgccgctgaccaatgcgcagggcgagcccaccggcgccttgttcggcgtggtcaacatg
ctgcgcgccaccttgaaggagcgcccggcctacatcgccttcgtggtggatgcgcccggt
aaaaccttccgcgatgacttgtatgccgactacaaggccaaccgaccgtcgatgcccgac
gacctgcgcgcgcaggtgcagccgatgtgcgacatcgtgcatgcgctgggcatcgacatc
ctgcgtatcgacggcgtggaagccgacgatgtgatcggcacgctggccctgcagggcgcc
gccgatggcctggccgtcaccatctccaccggcgacaaggacttcgcccagctggtgcgc
ccgggcatcgaactggtcaacaccatgagcggcagccgcatggattcggacgcggcggtg
gtcgccaagttcggcgtgcggcccgagcagatcgtcgacctgctggcgctgatgggggac
accgtcgacaacgtgcccggcgtggaaaagtgcggccccaagaccgccgccaaatggctg
gccgaatacgactcgctcgatggcgtcatcgccaatgccgacaagatcaagggcaagatc
ggcgacaacctgcgcgccgcgttgccacggctgccgctcaaccgcgcgctggtcaccatc
aagaccgatgtcaccctggccagcggcccgcgcgcgctggacctgcgcgagcccaacgcc
gaggcgctggcggtgctgtacgcccgctacggtttcacccaggcgctgcgcgaactcggt
ggtgcggccgccgcccaggcgggcctgctggccgagccggtggcgctgggcgctgctgct
gccgctgcgcgcaccgagccgggccgcgcgcgcggcaccggcttcgtctccggccccgtc
aacgccgcggtggatgtggatccgtcgctgtcggcgcccggccagtacgacaccatcctg
acccaggagcagctcgacagctggatcgcgcggctgcgtgccgccggccagttcgccttc
gataccgaaaccgacagcctggacccgctgcaagccgatttgatcggcctgagcgtggcc
gccgagcccggccaggcggcgtacctgccgttcggccacaacttccccggtgccccggtc
cagctcgaccgcacccaggcgctggcgcaactggccccgctgctgaccgaccctgcggtg
cgcaagctcggccagcacggcaagtacgacctgcacgtgatgcgccggcatggcgtggag
ctggccggctacgccgacgacaccttgctggagagcttcgtgctcaattccggcagcgcc
cgccacgacatggacagcctggccaagcgctatctcggctacgacaccgtcaagtacgaa
gacgtctgcggcaagggcgcaaagcagatcccgttcgcccagatcagcctggaagatgcc
acccgctacgccgccgaagacgccgacatcaccttgcgcctgcatcgcgtgctcggcccc
cgcctgaccagcgaaccgggcctggagcgcgtctaccgcgacatcgaaatgccgctggtg
gacgtgctggcccgcatcgaagccaacggagtgtgcgtggatgcggccgaactgcgccgc
cagagcgcggacctgtccaagcgcatgctcgccgcccagcagaaagccaccgagctggcc
gggcgcaccttcaacctggattcgcccaagcagctgcaggccctgctgttcgacgagctc
aagctccctgccgtggtcaagacgcccaagggtcagccctcgaccaacgaagaggcgctg
gaagccatcgccgaccagcacgagctgccgcgggtcatcctggaataccgtggactgacc
aagctgcgcagcacctacaccgacaagctgccggagatgatccacccgcagtccgggcgc
gtgcacaccagctaccaccaggccggtgccgccaccgggcggctgtcctcctcggatccg
aacctgcagaacatcccgatccgcaccgaagacggccgccgcattcgccgcgccttcgtc
gcaccgcccggacgcaagctgatcgcctgcgactattcgcagatcgagctgcgcatcatg
gcgcacctgtccggcgaccccgggctggtgggtgcgttcgagtccggcgccgacgtgcat
cgcgccacggccgccgaagtattcggccgcaccatcgacaccgtcagcgctgacgaacgc
cgcgctgccaaggcgatcaacttcggcctgatgtatggcatgagcgcctttggcctggcc
cgccagctcggtatcggccgcggcgaggcgcaggattacattgcgctgtacttcagccgt
tacccgggcgtgcgcgacttcatggaaaccacccgccagcaggcgcgcgacaagggctat
gtggaaaccgtgttcggccgcaggttgtacctggatttcatcaatgccggcagtcagggc
cagcgtgccggtgccgagcgcgccgccatcaacgcgccgatgcagggcaccgctgcggac
atcatcaagcgcgcgatggtcaacgtggatggctggatcgccgaccacgcgcaacgcgcg
aagatgattttgcaggtgcacgacgaactggtgttcgaagccgacgtcgatttcgtcgac
acgctgctgagcgaggtcaccacgcgcatggcgggcgctgctgaattacgcgtgccgctg
gtggtcgattcgggcgttggcgataattgggaccaggcgcattga
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