KEGG   Xanthomonas citri pv. fuscans: XFF4834R_chr40090
Entry
XFF4834R_chr40090 CDS       T03094                                 
Symbol
clpB1
Name
(GenBank) probable ATP-dependent Clp protease subunit, type VI secretion system
  KO
K11907  type VI secretion system protein VasG
Organism
xfu  Xanthomonas citri pv. fuscans
Pathway
xfu03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:xfu00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    XFF4834R_chr40090 (clpB1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xfu02044]
    XFF4834R_chr40090 (clpB1)
Secretion system [BR:xfu02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   XFF4834R_chr40090 (clpB1)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_16 AAA_5 AAA_22 Sigma54_activat Zeta_toxin AAA_14 AAA_7 NBD_SMAX1 NACHT nSTAND3 AAA_25 TniB AAA_18 ATPase_2 DUF815 Cyclin_N CbiA AAA_30 Hpr_kinase_C DAHL
Other DBs
NCBI-ProteinID: CDF63409
LinkDB
Position
complement(4631964..4634708)
AA seq 914 aa
MAEISRSALFGKLNPLAYRGIESATVFCKLRGNPDVELVHWLHQLLQLQDSDLHRIIKHF
QLNPSTLARDVTAALDGLPRGSTAVTDLSANVEEAVERGWVYASLSFGEAQVRTGSLVVG
MLSVRGLRHALLAISKEFDKLKPAVLNERFAEIVAGSPEDGLLPSDGFSLGQAAAPGETS
GAIAPAALGKQEALKKFTTDLTAQAREGKLDPIIGRDDEIRQVVDILMRRRQNNPILVGE
AGVGKTAVVEGFAQRIARGDVPPALKDVQLRALDVGLLQAGASMKGEFEQRLRAVIDEVQ
ASPKPIILFVDETHTLVGAGGAAGTGDAANLLKPALARGTLRTVGATTFAEYKKYIEKDP
ALTRRFQAVQVDEPDEAKAVRMMRGVASMMEQHHRVQILDEALEASVKLSHRYIPARQLP
DKSVSLLDTACARVAVSLHATPAEVDDSRRRIESLDTEQAIIERERAIGIVVDERAAACA
GLLDVERSRLQALEQRWVAEKALVDELLSLRAQLRNGSAPVEGTGSALEAEANAEQITSG
DTAVLDAPVQVDRDTLLARLQLVQAELAALQGESPLILPTVDYQAVAAVVADWTGIPVGR
MARNEIDTVLRLPELLAKRVIGQDHAMEMIAKRIQTSRAGLDNPDKPIGVFLLAGTSGVG
KTETALALAETLYGGEQNLITINMSEYQEAHTVSSLKGAPPGYVGYGEGGVLTEAVRRKP
YSVVLLDEVEKAHPDVHELFFQVFDKGWMEDGEGRRIDFRNTLIILTSNAGTDLIASLCK
DPELMPDPEGMAKSLREPLLKVFPPALLGRLVAIPYYPLSNTMLGQIVRLQLNRIKKRIE
ERYRIPFEYDESVVELVVSRCTESESGGRMIDAILTNSMLPEISRKFLRGIVDRERTERL
DIRAEESALVYSFL
NT seq 2745 nt   +upstreamnt  +downstreamnt
atggccgagatctcccgcagtgccctgttcggcaagctcaatccgctggcctaccgcggc
atcgaaagcgccaccgtgttctgcaagctgcgcggcaacccggatgtggagctggtgcat
tggctgcatcagttgctgcagctgcaggactcggacctgcaccgcatcatcaagcacttt
cagctcaatccgtccacgctggcgcgcgatgtcaccgccgcgttggatggcttgccgcgc
ggctccactgccgtgaccgatctatcggccaacgtcgaagaagcggtggagcgcggttgg
gtgtacgcctcgctcagttttggtgaagcgcaagtacgtaccggctctctggtggtcggt
atgttgagcgtgcgcggcttgcgtcatgcgttgctggcgatctccaaggagttcgacaag
ctcaagcccgcagtgctcaacgagcgcttcgccgagatcgtggccggctcgccggaagat
ggcttgctgcccagcgatggattctcgcttggtcaggccgctgcacccggggagaccagc
ggtgccatcgcgcctgccgcactcggcaagcaggaagcgctgaagaaattcaccaccgac
ctcaccgcacaggcgcgcgagggcaagctcgacccgatcatcggccgcgacgacgagatc
cgccaggtggtcgatatcctgatgcgccgccgccagaacaacccgatcctggtcggcgaa
gccggcgtcggcaagaccgcggtggtggaaggtttcgcgcagcgcatcgcacgcggcgat
gtgccgccggcgttgaaggatgtgcaactgcgcgcgctggatgtcggcttgctgcaggcc
ggcgccagcatgaagggcgagttcgagcagcgcctgcgcgcggtcatcgatgaagtgcag
gccagccccaagccgatcattctgttcgtcgacgaaacccacaccctggtcggcgccggt
ggcgcggccggcaccggcgatgcggccaatctgctcaagccggcactggcgcgcggcacc
ttgcgcacggtgggcgcgaccacgtttgccgagtacaagaagtacatcgaaaaggatccc
gcactgacgcggcgcttccaggcggtgcaggtcgatgagccagacgaagccaaggcggtg
cgcatgatgcgcggcgtcgcttcgatgatggaacagcatcaccgcgtgcagatcctcgac
gaagcgctggaagcgtcggtcaagctcagtcaccgctatatccccgcgcggcaactgcca
gacaagtcggtgagcctgctcgacaccgcctgcgcgcgcgtggcggtgagcctgcatgcc
acgccggcggaagtggacgacagccgccgacgcatcgaatcgctggacaccgagcaggcg
atcatcgagcgcgagcgcgcaatcggcatcgtggtggatgagcgtgctgctgcatgtgca
ggtttactggatgtcgaacgtagccggctgcaggcattggaacagcgttgggtcgcagaa
aaagcattggtcgacgaactgctgtcgctgcgcgcgcaactgcgcaacggcagcgcgccg
gtggagggcaccggcagcgcattggaagcagaggccaatgccgagcagatcacatccggc
gacacagcggtgctcgacgcaccggtgcaggtggatcgcgacacgctccttgcgcgccta
caactggtgcaggccgaactggctgcactgcaaggcgaatcaccgttgatcctgcccacg
gtcgactaccaagccgtggccgccgtcgtcgccgactggaccggcatcccggtcgggcgc
atggcgcgcaacgagatcgacaccgtgctacgcctgcccgaactgctggccaagcgcgtg
atcggccaggaccacgcgatggagatgatcgccaagcgcatccagaccagccgcgccggc
ctggataacccggataaaccgatcggcgtgttcctgctggccggcacctccggcgtgggc
aagaccgaaaccgcactcgctttggccgaaaccttgtacggcggtgagcagaacctgatc
accatcaacatgagcgaataccaggaagcgcataccgtctcctcgctcaagggtgcgccg
ccgggctatgtcggctatggcgaaggcggcgtgctgaccgaggccgtgcggcgcaagcca
tactcggtcgtcctgctcgacgaagtcgaaaaagcccaccccgacgtccacgaactgttc
ttccaggtcttcgacaaggggtggatggaagacggcgaaggccgccgcatcgacttccgc
aacaccctcatcatcctcaccagcaatgccggcacggacctgatcgccagcctgtgcaag
gacccggaactgatgcccgatccggaaggcatggccaagtccttgcgcgagccgttgttg
aaggtgtttccgcctgcattgctcgggcggttggtggcgattccgtattacccgctgagc
aacaccatgctcggccagatcgtgcgactgcagttgaaccgcatcaaaaagcgcatcgaa
gaacgctacaggattcccttcgaatacgacgagtctgtggtggagctggtggtgagccgc
tgcaccgagagcgagtcgggcggacggatgatcgatgcgatcttgaccaattcgatgttg
cctgagatcagtcgcaaatttctgcgtgggatagtggatcgggaacggactgaacgcctt
gatattcgtgctgaagagtccgcattggtttattcgttcctctga

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