Xanthomonas citri pv. fuscans: XFF4834R_chr41050
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Entry
XFF4834R_chr41050 CDS
T03094
Symbol
xynB1
Name
(GenBank) probable beta-xylosidase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu00520
Amino sugar and nucleotide sugar metabolism
xfu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
XFF4834R_chr41050 (xynB1)
Enzymes [BR:
xfu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
XFF4834R_chr41050 (xynB1)
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Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
CRR42-like
Motif
Other DBs
NCBI-ProteinID:
CDF63501
UniProt:
A0AB34Q6D3
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Position
4765992..4767683
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AA seq
563 aa
AA seq
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MRALSATCAALLMALAAPANAQAQASADVAFDWFEYRGDDAVFATPLPAGHYRNPVLAGF
YPDPSITRVGERYYLVNSTFTYFPAIPVFESTDLVHWTQIGNVVDRREQLDYDGLRMSRG
MYAASIRHHDGRFYVVGTSVDSGGNFIASAGDPAGPWSTLTWLPSIDGIDPSLFFDTDGS
VYLLNNGPPEGTPLYEGHRAIWMQRFDIATNQPVGPRKVLLNGGVDLASKPIWIEGPHLY
QRDGWYYLSCAEGGTGPQHSQVVLRSRSVWGPYAPAPNNPILTQRDLPAERAHPISNAGH
VDLVDTSDGQWWAVFLASRPYRGDRYNTGRETFLLPVQWRDGWPSILPAGQPIPYIARAP
AGMKAPATQAPLSGNFVWHDFDHTMLQREWLTVRVPKHEVADLRTRAGWLTLHASSQGLD
GTGTPAFLARRQQHMRFTASTALEVPTQAGVSAGLAAFQNSTAWYALGIRRDGDAVQVFL
DKRDGAATTTLAQTRIPATAQLRLQISGDGGAYSFAFDTDGRGWQSLRRNDDASFLSTEK
AGGFVGSVIGPFAQSHPDRPSQD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgctctctgccacgtgtgccgcgctgctgatggccttggcggcgcctgcgaac
gcgcaggcgcaggcgtctgccgatgtcgcgttcgactggttcgagtaccgcggcgacgat
gcggtgttcgccacgccgctgccagccgggcactaccgcaatccggtgctggccgggttc
taccccgaccccagcatcacgcgcgtgggcgagcgctattacctggtcaattcgacgttt
acgtacttcccggcgatcccggtgttcgagagcaccgatcttgtgcattggacgcagatc
ggcaacgtggtcgaccgccgcgagcagctcgattacgacgggctgcgcatgtcgcgcggc
atgtatgccgccagcatccgccatcacgacgggcgtttttacgtggtgggcacctcggtc
gatagcggtggcaatttcatcgccagtgccggcgaccctgcgggcccatggtcgacattg
acgtggttgcccagcatcgacggcatcgacccgtccttgttcttcgacaccgatggcagc
gtctatttgctcaacaatggtccgccggaaggcacgccgctgtacgaagggcatcgcgcc
atctggatgcagcgcttcgatattgccaccaaccagcctgtcggcccgcgcaaggtgttg
ctcaacggcggcgtggacctggccagcaagccgatctggatcgaaggcccgcacctgtat
caacgcgacggttggtactacctctcgtgcgctgagggcggcaccgggccgcagcattcg
caggtggtgttgcgcagccgcagcgtgtgggggccgtatgcacccgcaccgaacaacccc
atcctgacccaacgcgacctgccggccgagcgcgcacacccgatcagcaatgccggccac
gtggatctggtagatacgtccgatgggcagtggtgggcggtgtttctcgccagccgtccg
tatcgcggcgatcgctacaacaccggacgcgaaacgtttttgctgccggtgcagtggcgc
gatggctggccctcgatcctgccggccggtcagccgattccttacatcgccagggcgccc
gctggcatgaaggcacctgccacgcaggcgccgttgtcgggcaacttcgtctggcacgat
ttcgaccacaccatgctgcaacgcgaatggctgaccgtgcgcgtgccaaagcacgaggtg
gccgacctgcgcacgcgggcaggctggttgacgctgcatgccagcagccaggggctggac
ggtaccggcacacccgcgtttctcgcacgccgccaacaacatatgcgtttcaccgccagc
accgcactggaggtgccgacccaggcaggcgtcagtgcaggcttggccgcatttcagaat
tcgaccgcatggtacgcactcggcattcgtcgcgatggcgatgccgtgcaggtgttcctg
gacaagcgcgatggcgcggccaccaccacgctggcgcagacccgcatcccggccactgca
cagctgcggctgcagatcagcggcgatggcggtgcgtatagcttcgccttcgataccgat
ggccgcggctggcaatcgctacgccgcaacgacgatgccagctttctcagcaccgaaaag
gccggcggcttcgtcggcagcgtgattgggccattcgcccaatcgcatcccgaccgccct
tcacaggactga
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