Xanthomonas citri pv. fuscans: XFF4834R_chr41620
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Entry
XFF4834R_chr41620 CDS
T03094
Name
(GenBank) putative tetracycline-efflux transporter, MFS family
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
xfu
Xanthomonas citri pv. fuscans
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xfu02000
]
XFF4834R_chr41620
01504 Antimicrobial resistance genes [BR:
xfu01504
]
XFF4834R_chr41620
Transporters [BR:
xfu02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
XFF4834R_chr41620
Antimicrobial resistance genes [BR:
xfu01504
]
Gene variants
Tetracycline resistance genes
Transporters
XFF4834R_chr41620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_2
MFS_4
TRI12
Motif
Other DBs
NCBI-ProteinID:
CDF63550
LinkDB
All DBs
Position
complement(4841814..4843181)
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AA seq
455 aa
AA seq
DB search
MQHERQQVSQQPRATSISHPIPRYTRRFAQLRRAMSLSPDSAPVPGRRRAALIFIFITVL
IDVLSFGVIIPVLPDLVRHFTGGDYVVAAGWIGWFGFLFAAIQFVCSPLQGALSDRFGRR
PVILLSCLGLGLDFILMAIAHSLPMLLLARVISGVCSASFSTANAYIAGVTPPDKRAGAF
GMLGAAFGIGFVAGPLIGGWLGSIGLRWPFWFAAGLALLNVLYGWFVLPESLPAQRRTAR
LDWSHANPLGALKLLRRYPQVFGLASVVFLANLAHYVYPSIFVLFAGYQYHWGPREVSWV
LAGVGVCSIIVNALLVGRLVRRLGERRALLLGLGCGVIGFIIYGLADSGTAFLIGVPISA
LWAIAAPSAQALITREVGADAQGRVQGALTGLVSLAGIAGPLLFANVFAWFIGSGAPLHL
PGAPWLLAAVLLAAGWGMAWKRAARDAGTTPAAQT
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacgaacgacagcaggtgtcccagcaaccacgcgccaccagcatcagccaccca
atccctcgctacactcgccgcttcgcccaactgcgccgcgcgatgtccctctctcccgat
tccgctcccgtcccggggcgccgccgcgccgcgctgatcttcatcttcatcaccgtcctg
atcgacgtgctgtccttcggggtcatcattccggtactcccggatctggtgcgccatttc
accggcggcgactacgtcgtggccgccggctggatcggctggttcggcttcctgttcgct
gccatccagttcgtctgctcgccgttgcagggcgcgctctccgaccgcttcggtcgccgc
ccggtgatcctgctctcgtgccttggcctgggcctggacttcatcctgatggccattgcc
cacagcctgccgatgctgctgctggcacgggtgatctccggcgtgtgctcggccagcttc
tccaccgccaatgcctacatcgccggcgtcaccccaccggacaaacgcgccggcgcattc
ggcatgctcggtgccgccttcggcatcggctttgtcgccggcccgttgatcggcggttgg
ctgggcagcatcgggttgcgttggccgttctggtttgccgccgggcttgccctattgaac
gtgctgtatggctggttcgtgctgcccgaatcgctgcccgcccaacgccgcaccgcgcgg
ctggactggtcgcacgccaatccgctgggcgcactcaaactgctgcgccgctacccgcag
gtgttcggcctggcgtcggtggtgttcctggccaacctggcgcattacgtctatcccagc
attttcgtgctgttcgccggttaccaataccactggggcccgcgcgaagtgagctgggta
ctggccggggtcggcgtctgcagcatcatcgtcaatgcgttgctggtcggccgcctggtg
cgccggctcggcgaacgccgcgcgttgctgctggggctgggctgcggggtgatcggcttc
atcatctatgggctggccgacagcggcactgccttcctgatcggtgtgccgatcagtgcg
ttgtgggccattgccgcaccgtccgcgcaggccctgatcacccgcgaggtcggcgccgat
gcgcaaggtcgcgtgcagggcgcgctcaccggtctggtcagcctggccggcatcgccggt
ccactgttgttcgccaatgtcttcgcctggttcatcggcagcggtgcgccgctgcacctg
ccgggcgcgccgtggttgctggccgctgtcctgctggccgcaggctggggcatggcctgg
aaacgggccgcgcgcgacgccggcaccacacccgcggcgcagacgtga
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