Xanthomonas citri pv. fuscans: XFF4834R_chr42560
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Entry
XFF4834R_chr42560 CDS
T03094
Name
(GenBank) putative TrwC relaxase
Organism
xfu
Xanthomonas citri pv. fuscans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
Viral_helicase1
PhoH
UvrD_C_2
TraI_hel_assoc_N
TraI_2B
AAA_16
ResIII
PIF1
SLFN-g3_helicase
DUF4908
Phostensin
Herpes_Helicase
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CDF63637
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All DBs
Position
4934358..4937300
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AA seq
980 aa
AA seq
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MLNVTPIRGNNQYAAAHYFSAADDYYAKEHPGEWQGQGAQALGLTGPVEQAQLSRLLDGQ
LPNGERIQTTFDPTDNKKRMGLDLTFSAPKSVSMQALVAGDKDVTAAHDRAVTRALEQVE
RLAEARKKVNGKSYRERTANMVIGKFRHEMSRAKDPQLHTHAVVLNMTQRTDGAWRALSN
EDIFRVQHEVDALYKAELARGLQALGYAIRLVDDQGNFELDHISRDQIEAFSARSRVIEE
ALANEGKTRATATTLEKQIISLATRPRKDESDRELVKQYWVEKSRELGIDYGLRSQLDGR
TYEAGDSFGTRGRERGDAGNRIAAMSLPASLTPAQAVVQYAINHLTEREAVVRETALTAT
ALRRAVGLAGPDEVRAEIKRLAGQGALIEAVPAYRMADRKDGPALSSAGWKSYLQELKGW
SDKQAQQYVGNAIKQGSLVPAEKRYTTQKALAREKAILAIERTGRGAIEPIMTAAAVKTA
LEGTALNAGQRSAVETIVSTKNRFVGIQGDAGTGKTYTVNQAVALIKQASAVSEGYRTVA
LAPYGNQVKALKNEGLEAHTLASFLRTKDKPIDGKTIIVLDESGVVGARQMEQVMRVVEK
AGARMVLLGDTKQTEAIEAGKPFAQLQQDGMQTARISEIQRQKDHELKTAVEHAAEGRVT
PSLAHIKHVEELKEPIERHRAIVNDYIQLTEPERRETLIVAGTNEARREINRMVRQSLDL
TGKGREFETLTRVDMTQAQRRFAPSYQPGMVIQPEKDDQKAGLTRGETYRVKEALPGNAL
VLQRQDGTTTTINPRKATQLSVYRLERAELSVGDTVRINRNDPGRDLTNGDRMRVAGVIG
GVVKLESVEQRDGRPARALELPTNRPLHLEHAYASTVHSAQGLTNDRALIALDTKSRTTS
MNLYYVAISRACHQARVYTNSVKELPAAIARRFDKTTALAIQRERQLQRRAAGMQPKGAA
DGKQALQRQQLQQGVQRTYV
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatgtgacgccgattcgcggcaacaaccagtacgcggccgcgcattacttctcg
gcggccgacgactactacgccaaggagcaccccggcgagtggcaaggccaaggtgcacag
gcgcttggcctgacgggaccggttgaacaggcgcagctctcgcggttgctggacggccaa
ctccccaacggcgagcgcatccagacgacctttgacccgaccgacaacaagaagcgcatg
gggctggacctgacgttttccgccccgaagtcggtttccatgcaggcgcttgttgctggc
gacaaggacgtcacggctgcgcacgaccgcgccgtgacgcgcgcactggagcaggtcgag
cggctggccgaggcccggaagaaggtcaatggaaagagctaccgcgagcgcaccgcaaac
atggtcatcggcaagtttcggcacgagatgagccgggccaaagacccgcagctacacacg
catgcggtcgtgctcaacatgacccagcgcaccgatggcgcttggcgcgcactgtcgaac
gaggacatattccgcgtgcagcacgaggtagacgcgctctacaaggccgagctggccagg
ggcttgcaagcgcttggctacgcgatacgcctggtcgatgaccagggcaatttcgagctg
gaccacatcagtcgcgaccagatcgaggcgttttcggcacgtagtcgcgtcatcgaggaa
gcgcttgccaacgagggcaagacgcgagcgacagcgaccacgcttgaaaagcagatcatt
tcgcttgccacgcggccgcgcaaagacgagtccgaccgcgagctggtcaagcagtattgg
gtcgaaaaaagccgcgagcttgggatcgactacggcctgcgctcgcagctcgatggccgc
acctacgaggcaggcgacagcttcggcacccgtggccgtgagcggggcgacgccggcaac
cgcatcgcagccatgagcctgccggcgagcctcacaccggcacaagccgtcgtgcagtac
gccatcaaccacctgaccgagcgtgaggctgttgttcgcgaaaccgcgctcacggccacg
gcgttgcgtcgcgcggtcgggctggcaggaccggacgaggttcgcgccgaaatcaagcgg
ctcgccggccaaggcgcgttgatcgaagccgtgccggcgtatcgcatggccgaccgcaag
gacgggccggcgctctcgtcggccggctggaaaagctatctgcaagagctgaaaggctgg
tccgacaaacaggcgcagcagtacgtcggcaacgcgatcaagcagggttcgctcgtgccg
gccgagaagcgttacacgacacagaaggcgctcgcccgcgagaaagcgattctcgccatc
gagcgcaccgggcgcggagccatcgagccgatcatgacggcggccgccgtcaaaacggcg
ttggaaggcaccgcgttgaacgccggccagcgttcggccgtggaaaccatcgtcagcacc
aagaatcggttcgtcggcatccagggcgacgccggcaccgggaaaacctataccgtgaat
caggcggtcgcgctcatcaaacaggcgtcggccgtgagcgagggctaccgcaccgtcgcg
ctcgcgccctacggcaatcaggtcaaggcgctcaagaatgaagggctggaagcgcacacg
ctggccagctttctgcgcaccaaggacaagcccatcgacggcaagacgatcatcgttctg
gacgaatcgggcgtcgtcggcgctcgccagatggaacaggtcatgcgggttgtcgagaaa
gccggcgctcgcatggtcttgcttggcgacaccaagcagaccgaggccatcgaggccggc
aagccgttcgcgcagctccagcaggacggcatgcagaccgcgcgaatcagcgagattcag
cgccagaaagaccacgagctgaaaaccgctgtcgagcacgcggccgagggccgtgtcacg
ccatcgctcgcgcacatcaagcacgttgaggagctgaaagagccgatcgagcggcaccgg
gccatcgtgaacgactacatccagctcaccgaacccgagcgccgcgaaacgctgatcgtt
gccggcaccaacgaggcccgccgcgagatcaaccgcatggtgcgccagtcgctggacctg
accggcaagggacgggagttcgagacgctgacccgcgtggacatgacgcaggcacagcgc
cgctttgcgccgagctatcagccgggcatggtgatccagcccgagaaggacgaccagaaa
gccggcctgacgcgaggcgagacctaccgcgtcaaggaagcattgcccggcaatgcgctg
gtcttacagcggcaggacggcaccaccacgacgatcaacccgcgcaaggcgacgcagctc
agcgtctaccgccttgagcgcgccgagctgtcggtcggggataccgtgcggatcaaccgc
aacgatcccggccgcgacctcacgaacggcgaccgcatgcgcgttgccggcgtgatcggc
ggcgtcgtcaagctcgaatcggtcgagcagcgcgacggcaggccggcacgcgcgctcgag
ctgccgacgaaccgaccgctccaccttgagcacgcctatgcgtccaccgtccacagcgcg
cagggcttgaccaacgaccgcgccctcatcgcgctcgataccaagagccgcaccacgtcg
atgaatctgtattacgttgccatcagccgcgcctgccaccaggcgcgcgtctacacgaac
tcggtcaaggagctgccggccgccatcgcgcggcgcttcgacaagacgacggccctagcg
atccagcgcgaacgccaattgcagcgccgcgccgccggtatgcaacccaagggcgcagcc
gacggcaagcaggcgttgcagcggcagcagctccaacagggggttcagcggacatacgtg
taa
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