Xanthomonas hortorum pv. gardneri: BI317_00010
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Entry
BI317_00010 CDS
T04668
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
xga
Xanthomonas hortorum pv. gardneri
Pathway
xga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BI317_00010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xga03400
]
BI317_00010
Enzymes [BR:
xga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BI317_00010
DNA repair and recombination proteins [BR:
xga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BI317_00010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
APP82812
LinkDB
All DBs
Position
complement(1029..4427)
Genome browser
AA seq
1132 aa
AA seq
DB search
MMPAPDFRLYPSNALDTLAALLAQEVRRPVPEQPLLQPEVVLIPQVAMRRWLQATLAAEH
GVAANLEFLTPGEFVARALECNLGPADDDLDMATTQWRLYDALQADLGSDAALAPLAGYL
SDGDAFKPWALAGELGNVFEKYQAWRRDWLLRWEGGADPDDPQARLWRSIASGRQYRARR
IGQYLDRFARADGPLPQGLPKRLFAFAILNISPDVLRVLATQARVGTLHFYLPTPTQGYW
GDLQTLWQRRREDGAVQLFAEQVQENPLLQAWGAAGRDFMALVGDYEVVHPLAEIAAYAD
PLESGRRALAHGGLGDSLLRRMQSDLFHRRAPVVPALLPAVNLHDPSLQVHACHTRLREL
QVLHDQLRALLDDARFDPPLQPREIAVLSPNIDPYVPYLDAVFGSHGNDDALPYALADAS
PLASEPLAEVFLTLLGLPIARFGLHEILDLLASAPIAEAAGLDEAGLERLRGWLHAAGAR
WGLDAAHRREHQAPSDDAYTWRFALDRLLLGHASGADDDIEGVAPWPQLEGSALAALDTL
LKLLRVLERHQSLLAEAKTPVEWRERLLGLLEELIPTTPSAPRAQRALDRLRTLIDQFAR
DAVRAEYAGKVPAEVVRAHFAAVLGESDTRAPLLTGGISFGRMVPMRLLPFRAICLLGMN
DGDFPRRDPAAGLNRLTAELGTERRRHGDRSTREDDRFLFLQLFASAQEVFYLSYLGADA
RDGSAREPSVLVSELLASAAQYHADPKAIDTLVVRHPLQPFAAAAFGAPGDHGADPRRFS
YRRQWRPAVDSLVGQRQPLAPWVAAALPADDIAVPTSVSIDELRRLFAEPAGQFLRHRLG
MRLPDPAGEDSDLEPLLAPTRGLDQYGLQQHVFDAALAGDTDRLYERLRARALLPSGPLG
RRQLDERVTQLRPYAEAFRQWRGESPAESRRLQVQIGDVEVHGRVPGWYASGVGRVQVGA
LSGRSAIRHGLEWLLLRAAGEHAPYVRFFEDEDGLGPHPIDPEPLSQTQAQTALAELLQV
YWQGLQTPLAFALYSSWKYHQAARSDDLDKAIKDAAGQWQSSFGWSESHSPELRLVNRGR
DPFADAQRFAEFAITSHRVYDLLERGNADATLDPERLIESWRHWHGAQEEAE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggcgcccgattttcgtttgtacccgtccaacgcgctggatacgctggccgcc
ttgctcgcacaggaggtgcgccggccggtgccggagcagccgttgttgcagccggaggtg
gtgctgattccgcaggtggcgatgcggcgctggttgcaggccacgctggcggccgagcac
ggtgttgcagcgaatctggaattcctcacccccggcgaattcgtcgcgcgcgcgctggaa
tgcaatctcggcccggccgacgacgatctggacatggcgaccacgcagtggcgcctgtac
gacgccttgcaggccgatctgggcagcgatgcggcgttggcgccgctggccggttatttg
tccgatggcgatgcgttcaagccctgggcgctggccggcgagctgggcaacgtgttcgag
aagtaccaggcctggcgacgcgactggttgctgcgctgggaaggcggcgccgaccccgac
gacccgcaggcgcgcttgtggcgcagcatcgcgtccgggcggcaataccgcgcccgccgc
atcggccagtatctggatcggtttgcgcgggccgatggtccgctgccgcagggcttgccg
aagcgcctgtttgccttcgccatcctcaacatctcgcccgacgtgctgcgcgtgctggcc
acgcaagcgcgcgtaggcacgctgcatttctatctgcccacgccgacgcaaggttactgg
ggcgatctgcaaaccttgtggcaacgccgtcgcgaagacggcgcggtgcagctgttcgcc
gagcaggtgcaggaaaacccgctgctgcaggcctggggcgcggccgggcgcgatttcatg
gcgttggtcggcgattacgaggtagtgcatccgctggccgagatcgccgcctacgccgat
ccgctggagtccggccgccgcgcactggcccatggtggtctgggcgacagcctgctgcgg
cgcatgcagagcgacctgttccatcgtcgtgcgccggtggtgccggcactgttgcctgcg
gtgaatctgcacgaccccagcctgcaggtgcacgcctgccacacccgcctgcgcgagctg
caggtgctgcacgaccaactgcgcgccttgctcgacgatgcgcgcttcgacccgccgctg
cagccgcgcgagatcgcggtgctgtcgccaaatatcgacccgtacgtgccgtatctggac
gcggtgttcggcagccacggcaacgacgacgcgctgccgtatgcgctggccgatgccagc
ccgttggcgagcgagccgctggccgaggtgttcctcaccttgctcggcttgccgattgca
cgcttcggcctgcacgagattctcgacctgctggccagtgcgccgatcgccgaggccgcc
ggcctggacgaagccgggctggaacgcctgcgcggctggctgcacgcggccggcgcgcgc
tgggggctggatgcggcgcatcggcgtgagcaccaggcaccgagcgacgacgcctacacc
tggcgcttcgcgctggaccggctgctgctcggccatgccagcggcgccgacgacgatatc
gagggcgtggcgccatggccgcagctggaaggcagcgcgctggccgcactcgataccttg
ttgaagctgttgcgcgtgctcgaacgccatcaatcgttacttgccgaagcgaagacgccg
gtcgagtggcgcgagcgtctgctcggcctgctggaagagctgattccgaccacgccctcg
gcaccgcgtgcgcagcgcgcgctggatcgcttgcgcacattgatcgaccaattcgcccgc
gacgcagtgcgcgccgagtacgccggcaaagttcccgccgaggtggtgcgtgcgcacttc
gccgcagtgctgggcgagtcggacacgcgcgcgccgttgctcaccggcggcatcagtttc
ggccgcatggtgccgatgcgcttgttgccgttccgcgcgatctgcctgctcggcatgaac
gacggcgacttcccgcgtcgcgaccccgctgccggccttaatcgcctcaccgccgagttg
ggcaccgagcgccgccgccacggcgatcgttcaacgcgcgaggacgaccgctttctgttt
ctgcagttgttcgcctctgcgcaggaagtgttttatctgagttacctcggcgccgatgcg
cgcgatggcagcgcacgcgaaccgtcggtgctggtcagcgaattgctggccagcgccgcg
caatatcacgccgacccaaaggccatcgatacgctggtcgtgcgccacccgttgcagcca
ttcgccgccgccgcgttcggtgcgccgggcgatcacggcgccgacccgcgccgcttcagt
tatcgccgccaatggcggcccgcggtagatagcctggttggtcagcgccagccgctggcg
ccatgggtggccgctgcgttgccggccgatgacatcgcagtgccgaccagcgtctcgatc
gacgagctgcgccgcctgttcgccgagccggccgggcagtttctgcgccatcgtttgggc
atgcgcctgcccgatccggccggcgaagacagcgacctcgagccgctgctcgcgcctacg
cgcggcttggatcaatacggcctgcagcagcatgtgttcgacgccgcactggcgggcgac
accgaccggctctatgagcgtttgcgcgcccgcgcgctgctgccatccgggccgctgggg
cgtcgccagctcgatgagcgcgtgacgcaactgcgcccttatgccgaggcgttccggcaa
tggcgtggcgagtcgccggccgagtcgcgccggctgcaggtgcagatcggcgatgtcgag
gtgcatggccgcgtgccaggttggtatgcgagcggcgtagggcgggtgcaggtcggtgcg
ctcagtggccgcagcgcgatccgccacggcctggaatggctgctgctgcgcgccgccggc
gaacacgcgccctacgtgcgcttcttcgaagacgaagacggtttgggcccgcatcccatc
gaccccgaaccgctgtcgcaaacgcaggcgcaaaccgcgttggccgaactgctgcaggtt
tactggcagggcttgcagacgccgctggccttcgcgctctacagcagctggaaatatcac
caggccgcgcgcagcgacgatctggacaaagccatcaaggacgccgccgggcagtggcaa
tccagcttcggctggagcgaatcgcacagcccggaactgcgcctggtcaaccgcggccgc
gacccgttcgccgatgcgcagcgcttcgccgagttcgccatcaccagccatcgtgtgtac
gacttgctcgaacgcggcaatgccgacgccacgctggatccggagcgtttgatcgagagc
tggcgccactggcacggcgcgcaggaagaggccgaatga
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