Xanthomonas hortorum pv. gardneri: BI317_00905
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Entry
BI317_00905 CDS
T04668
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
xga
Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xga02000
]
BI317_00905
Transporters [BR:
xga02000
]
Other transporters
Pores ion channels [TC:
1
]
BI317_00905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
RSRP
Motif
Other DBs
NCBI-ProteinID:
APP82962
LinkDB
All DBs
Position
205928..208063
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AA seq
711 aa
AA seq
DB search
MPRLTLLAAACGLFATSAAPLAPAADTAPSSTPIQRLPTVQVDAARVHGVDDFDLPASFT
VVAADDDNRRGAQVSELLDGIPGLVARDRQNYAQDTQLSIRGFGARSTFGVRGVRLLVDG
IPASMPDGQGQLSHFNVLGAERVEVLRGPFSALYGNSSGGVLQLWSADGKPGDPWRLRAT
YGSNATVNVGAQLLGQQGAVHYNLAANHFETDGFRDHSRARRDSVNAKLGFDLAEGRRLD
LVLNYLDAPDAQDPLGLTRAQFNADPAQATAVATQFNTRKSVRQSQAGAIFTQQFDSQTL
RLMAYGGQRSVEQYLAIPVAVQRNPLHSGGVIDLDSNYEGADARWAWQGEALGRPLQLTV
GANVDRQRQHRTGYENFVGDTLGVKGALRRNQRDQVENVDQFAQLWWQWSERWSALLGVR
HSEVRFDSDDHYIIGRNPDDSGQRDYSAATPVAGIVFRAAEDLRFYASVGRGFETPTFNE
LGYRNDGGAGLALDLGAATSRNYEVGSKWRAQSGAAVEFALFRADTDDELAVSSNTNGRS
TYRNIGATRRQGAELSWNQPVGDTQQVQLAYTFVDATVRDGYLTCASSGCATPTAPVASG
ARLPGVPRQQLFARWQWQPMQWQFAAETVASDATVVNDLATERAPGYALVNLEASRRWTT
SVGALRTFARIDNLLDRQYVGSVIVNDGNGRYYEPGPDRTYTVGLQWDFGG
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgcccagactcaccttgttggccgccgcgtgcggcctgttcgccacgagcgccgcgccg
ctcgccccggccgccgacacggcgccgtcgtctacaccgatccagcgcttgcccaccgtg
caggtggacgccgcgcgcgtgcacggggtggacgacttcgacctgccggcctcgttcacc
gtggtggcggccgacgacgacaaccgccgcggcgcgcaggtgtccgagctgctcgatggc
atcccaggcctggtggcgcgcgaccgccagaactacgcgcaagacacccagctctcgatc
cgcggcttcggcgcgcgctccaccttcggcgtgcgcggcgtgcgcctgctggtggacggc
atcccggccagcatgcccgatggccagggccagctctcgcacttcaacgtgctgggcgcc
gagcgggtggaagtgctgcgcggcccgttctcggcgctgtacggcaattcctccggcggg
gtgctgcagctgtggagcgccgacggcaagccgggcgacccgtggcggctgcgggccacc
tacggcagcaacgccaccgtcaatgtcggcgcgcaattgctcggccagcagggcgcggtg
cactacaacctggccgccaatcatttcgaaaccgacggctttcgcgaccatagccgcgcc
aggcgcgattcggtcaacgccaagctcggtttcgatctggccgaaggccgccggctggat
ctggtgctcaactatctggacgcacccgacgcgcaggacccgctcggcctgacccgcgcg
cagttcaatgccgacccggcgcaggccacggcggtggcgacccagttcaacacccgcaaa
tcggtgcgccaatcgcaggccggggcgatcttcacccagcagttcgacagccagacgctg
cgcctgatggcctacggcgggcagcgcagcgtggagcagtatctggcgatcccggtggcg
gtgcagcgcaacccgctgcattcgggcggggtgatcgatcttgacagcaattacgaaggt
gccgatgcacgttgggcctggcaaggcgaagcgttgggccggccgctgcagctgaccgtg
ggcgccaatgtcgatcgccagcgtcagcaccgcaccggttacgaaaattttgttggtgac
acgctcggcgtcaaaggcgcactgcgccgcaatcagcgcgatcaggtcgagaacgtggac
cagttcgcacagctgtggtggcaatggagcgagcgctggtccgccttgctgggcgtgcgc
catagcgaggtgcgcttcgactcggacgaccattacatcatcggccgcaatcccgacgac
agcggacagcgcgattattcggcggccacgccggtggccggcatcgtgttccgtgccgcc
gaggatctgcgtttctacgcgtcggtcggacgcggtttcgaaacgcccaccttcaatgag
ttgggctatcgcaacgatggcggcgccggcctggcgctggatctgggcgcggcaacaagc
cgcaactacgaagtcggcagcaagtggcgcgcgcaaagcggtgctgcggtggaattcgcc
ttgttccgtgccgacaccgacgacgaactggcggtgtccagcaacaccaatggccgcagc
acctatcgcaacatcggcgccacccgccgccagggcgcggagctgagctggaatcaaccg
gtgggcgacacccagcaagtacagctggcctacaccttcgtcgatgccaccgtgcgcgat
ggctacctcacctgcgccagcagcggctgcgccacacccaccgcgccagtggcaagcggc
gcgcgcctgccgggcgtgccgcgtcagcaactgttcgcacgctggcagtggcagccgatg
caatggcagttcgccgccgaaacggtggcctccgacgccaccgtggtcaacgacctggct
accgaacgcgcacccggctatgcgctggtcaatctggaagcctccaggcgctggaccacg
agtgtcggcgcgctgcgcaccttcgcccgcatcgacaatttgctggatcggcaatacgtg
ggctcggtgatcgtcaacgacggcaacggacgctattacgagccgggtccggaccgcacc
tatacggtggggctgcagtgggatttcggtggctga
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