Xanthomonas hortorum pv. gardneri: BI317_00945
Help
Entry
BI317_00945 CDS
T04668
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
xga
Xanthomonas hortorum pv. gardneri
Pathway
xga03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BI317_00945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xga03400
]
BI317_00945
DNA repair and recombination proteins [BR:
xga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BI317_00945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
QueG_DUF1730
Motif
Other DBs
NCBI-ProteinID:
APP82970
LinkDB
All DBs
Position
213620..214567
Genome browser
AA seq
315 aa
AA seq
DB search
MARPIWTGTLSFGLLNVPVSLMSGERKVDLHFRMLDSRDKKPIRFERVNADTGDEVPWKE
IVKAFEYDKGSYVIVEEQDIRSASPESHETVEVETFVDAADIDPRYFEKPYILVPGKKAE
KGYVLLRETLRDTGKVGIAKVVIRTREYLAAVMPQGDALILLLLRYQQEVVDPQDFKLPA
GAVGEYRITPKEQEMARQLIESMSGTWQPEDYHDEFRGKLEQLLRKRIQEKGGTTKVDIE
PPQHEDATTNVVDFMSLLQKSLQANTRTPAKKSSAPAAPAKKTATKKAAKKATKKTASKP
TKTAAAKAPPRRKAG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaccgatctggaccggaaccctctcgttcggcttgctcaatgtgccggtgtcg
ctgatgtcgggcgagcgcaaggtggacctgcatttccgcatgctcgactcgcgcgacaag
aagccgatccgcttcgagcgcgtcaatgccgacaccggcgacgaggtgccgtggaaggag
atcgtcaaggcattcgagtacgacaagggcagctatgtgattgtggaggagcaggatatc
cgatcggcctcgccggaaagccatgaaacggtagaggtggagacctttgtcgacgccgcc
gacatcgacccgcgctatttcgaaaagccctacatcctggtgcccggcaagaaagccgaa
aaaggctatgtgttgctgcgcgaaacgctacgcgacaccggcaaggtgggcatcgcaaaa
gtggtcatccgtacccgcgagtacctggcggcggtgatgccgcagggcgatgcgttgatc
ctgctgctgctgcgctaccagcaggaagtggtggacccgcaggacttcaagctgccggcc
ggcgcggtgggcgaataccgcatcacgcccaaggaacaggagatggccaggcagttgatc
gagtcgatgtccggcacctggcagccggaggattaccacgacgaattccgcggcaagctg
gagcagctgctgcgcaagcgcatccaggaaaagggcggcaccaccaaggtggacatcgag
ccgccgcagcacgaagacgccaccaccaacgtggtcgatttcatgtcgctgctgcagaag
agcctgcaagccaatacacgcacgccggccaagaaaagcagtgcgccggcagcgcctgcc
aagaaaaccgcaaccaagaaggcggccaagaaggccaccaaaaagaccgcgagcaagccg
accaaaacagcggctgcgaaagcaccgccgcgccgcaaggccggatag
DBGET
integrated database retrieval system
