Xanthomonas hortorum pv. gardneri: BI317_01280
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Entry
BI317_01280 CDS
T04668
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
xga
Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xga02000
]
BI317_01280
Transporters [BR:
xga02000
]
Other transporters
Pores ion channels [TC:
1
]
BI317_01280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Minor_tail_Z
Motif
Other DBs
NCBI-ProteinID:
APP83022
LinkDB
All DBs
Position
291847..293907
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AA seq
686 aa
AA seq
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MTPLPAPRHLLFVSLFAAMPAAAQEASLLDAIVVSEKRALYRPEKAAGATRTQTPVERIP
QAIQVVPRSVIDEQQLTRLVDVVANVSNVQPGGTQGNRSETFVIRGFEASSYAVDGILLN
PAQNFTETVRDLANVAQVEVLKGPAAVLYGRGEPGGVINLVTLRPDAVFGGNASVQVAEH
GLRRVQSSVTGPLSPTVSARLSAAAQETGSFRAAQADGDRVFVSPSLAWRPNEQLRADLD
LEYTRQTSPGDRGLVAINGVVRGPAERSFGEPWSRNHGSSRTARGRIEYDANDWLTLRQI
LNHQDGDSGRDVADFTGFSADRAFLQRRAVRQDQQVRATTSQTEALARFDTGPLRHQVLA
GAEYVDAHRQTDEARAPLARISVTNPVQGALPGTYVPARAIEVDARYAALYVQDQISIGE
RWDVLAGVRWDDVQQTTIDNGARTREDGRRASPRIGVVWKAGPQLSLYANTSTSFRPRSA
NLFAGGSAPPETGRQYEIGMKSALFDNRVLATAAAFQITKDNVATSDPDNSGFVLVTGQQ
RVRGVEMDITGELTQNWRLILGAGYLDAQVTRDTVIPEGNRLRGVPRVSASLWSTYHVAS
GPLYGLTLGAGAVHVGEREGDLANSYRIAGYTRFDASAAYRFGGRYQLALMLRNVANRFY
IEQPVTQTTNYPGAPRTLSATLSMDF
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaccccactgcctgcgcctcgccacctgttgttcgtgtccctgtttgccgccatgccg
gccgctgcccaggaggccagcctgctcgacgccatcgtggtcagcgaaaagcgcgccctg
taccggccggaaaaagccgccggcgccacccgcacgcagacgccggtggagcgcattccg
caggcgatccaggtggtgccgcgctcagtgatcgacgaacagcagctcacccggctggtc
gatgtggtggccaatgtctccaacgtgcagcccggcggcacccagggcaatcgttcggaa
accttcgtcattcgcggcttcgaggcgtcctcgtacgcggtcgacggcatcctgctcaac
ccggcgcagaacttcaccgagaccgtgcgcgatctggccaacgtcgcccaggtggaagtg
ctcaagggcccggccgcagtgttgtacgggcgcggcgaacctggcggggtgatcaatctg
gtcacgctgcgcccggatgcggtgttcggcggcaacgcctcggtgcaggtggccgaacat
ggcctgcgccgcgtgcaatccagcgtcaccggcccgctgagcccgacggtatcggcacgg
ctcagcgccgccgcgcaggaaaccggcagctttcgcgctgcgcaggccgatggcgaccgc
gtattcgtctcgccctcgctggcatggcggccgaacgaacagctgcgggccgatctggat
ctggaatacacccgccagaccagcccgggcgatcgcggtctggtcgccatcaatggcgtg
gtgcgtggcccggccgagcgcagttttggcgagccgtggtcgcgcaatcacggcagctcg
cgcaccgcacgcgggcgcatcgaatacgacgccaatgactggttgacgctgcgccagatc
ctcaatcaccaggacggcgacagcggccgcgacgtggccgacttcaccggtttcagcgcc
gatcgcgcgtttctgcaacgccgcgcggtgcgccaggaccagcaggtgcgcgccaccacc
tcgcagaccgaagcgctggcgcgtttcgataccggcccgctgcgccatcaagtgctggcc
ggcgccgaatacgtcgatgcgcatcgccagacagatgaagcccgcgcgccgctggcccgc
atcagcgtgaccaatccggtgcagggcgccttgccgggcacctacgtgccggcgcgcgcc
atcgaggtcgatgcgcgttacgccgcgttgtacgtgcaggatcagatcagcatcggcgag
cgctgggatgtgctggccggcgtgcgctgggacgatgtgcaacagaccaccatcgacaac
ggcgcgcgcacccgcgaagacggccggcgcgcatcgccacgtatcggcgtggtgtggaag
gcgggcccgcagctgtcgctgtacgccaacacctccacttcgtttcggccacgcagcgcc
aacttgtttgccggcggcagcgcaccgccggagaccggccgccagtacgaaatcggcatg
aaaagcgcactattcgacaaccgcgtgctcgccaccgctgccgcatttcagatcaccaag
gacaacgtcgccaccagcgatccggacaacagcggcttcgtgctggtcaccggccagcag
cgcgtgcgcggggtggagatggatatcaccggcgagctcacccagaactggcggctgatt
ctgggcgccggctatctggacgcacaggtcacccgcgataccgtcattccggagggcaat
cgcctgcgcggcgtgccgcgcgtcagtgccagtctatggagcacctaccacgtcgccagc
gggccgctgtatggcctgaccttgggcgcaggcgcggtgcatgtgggcgaacgcgaaggc
gatctcgccaatagctatcgcattgccggctacacgcgtttcgatgcctcggcggcatac
cgcttcggcggccgttatcaactggcgctgatgctgcgtaatgtcgccaaccgtttctac
atcgagcaaccggtgacgcagaccaccaattatccgggcgcaccgcgcaccttgtcggca
acgttgagtatggatttctaa
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