Xanthomonas hortorum pv. gardneri: BI317_03510
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Entry
BI317_03510 CDS
T04668
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
xga
Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xga03009
]
BI317_03510
Enzymes [BR:
xga01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
BI317_03510
Ribosome biogenesis [BR:
xga03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
BI317_03510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_25
FtsJ
Methyltransf_12
MTS
Methyltransf_11
Methyltransf_5
Methyltransf_33
Methyltransf_24
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
APP83378
LinkDB
All DBs
Position
798179..799489
Genome browser
AA seq
436 aa
AA seq
DB search
MSTEAATAGVASRLAAARVLTAVFDQGRSLKAELAASLPGLSDPRDRALVEAICFAVLRR
RPAYDVALRQWLERPLPPRDAELKALLMAGFAQLDVLQLPAHAALSATVDACRALGRPRQ
AGMVNAILRRAQREGFPAVSADAGWPSWLRKQLRADWGDHAETIFVASALMAPMWLRVHR
GRTDPAAYVARLAELGIAAEIDAMLPDAVRLHSALPVSQLPGFAEGEVSVQDGSAQQVAD
ALQLTPSARVLDACAAPGGKAAHLLERHPGLQLTALDVDARRLERVQQTLQRTVPGAQVA
LHAADAADPAAWWDEQPFDAVLLDAPCSATGVVRRQPDVLLHRRADDIDALCALQARLLD
ATWRTLRPGGQLLYTTCSLLARENQAQVEAFLQRTPDAQAQPLGAQFGHAAGPGRQRFPG
EQHCDGFFYALLLKTS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggaagccgccactgccggcgttgcctcgcgtctggctgcagcgcgggtgctg
acggcggtgttcgaccagggccgctcgctcaaggccgaactggccgcgagcttgcccggc
ctgagcgatccacgcgaccgcgcgctggtggaggcgatctgttttgcggtgctgcgccgc
cgcccggcctacgacgtagcgctgcggcagtggctggagcgcccgttgccgccgcgcgat
gccgaactgaaagcgctgctgatggccggcttcgcccagctcgacgtgctgcaactgcct
gcgcatgcggcgttgtcggccaccgtggacgcgtgtcgtgcgctgggccggccgcgtcag
gccggcatggtcaacgcgatcctgcggcgtgcgcagcgcgaaggatttccggcagtgtct
gccgatgccggttggccgtcctggttgcgcaagcagctgcgtgccgattggggcgaccac
gccgaaaccatttttgtggcaagcgcgctgatggcgccgatgtggctgcgggtgcatcgc
gggcgcacggatccggccgcgtatgtcgcgcgcctggccgaactgggcatcgctgcggaa
attgatgcgatgttgccggatgcggtgcgcttgcacagtgcgctgccggtgagtcaattg
ccgggttttgccgaaggcgaggtctcggtgcaggacggttctgcgcagcaggtggccgat
gcactgcagttgactccgtcggcgcgcgtgctcgatgcctgcgccgcgcccggtggcaag
gcggcacacctgctggaacgtcatcccggcttgcagctcactgcgctggatgtggatgcg
cgccggctggaacgcgtgcagcagaccttgcagcgcaccgtgccgggcgcgcaggttgcg
ctgcatgcggccgacgctgccgatcccgctgcgtggtgggacgagcaaccgttcgatgcg
gtgctgctggatgcgccgtgttcggctaccggcgtggtgcgtcgtcaaccggatgtgctg
ctgcatcgccgcgccgacgatatcgatgcgttgtgcgccttgcaggcacgcctgctcgat
gcgacctggcgcacgctgcgtccgggcgggcagttgctctacaccacctgttcgttactg
gcgcgcgagaaccaggcgcaggtggaggcgtttctgcagcggaccccggatgcccaggcg
cagccgttgggtgcgcagtttggtcatgcggcagggccggggcgccagcggtttccaggc
gagcagcactgcgacggatttttctacgcgcttttgctaaaaacctcctga
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