Xanthomonas hortorum pv. gardneri: BI317_04350
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Entry
BI317_04350 CDS
T04668
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
xga
Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xga02000
]
BI317_04350
Transporters [BR:
xga02000
]
Other transporters
Pores ion channels [TC:
1
]
BI317_04350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
ESPR
Motif
Other DBs
NCBI-ProteinID:
APP83528
LinkDB
All DBs
Position
979709..986278
Genome browser
AA seq
2189 aa
AA seq
DB search
MNRIYRKVWNKALGVWAVASELASGDSPGAVTTAAFIDRRQSRCLVAAIALALGSAGIAI
PLSAMAQSVEVGDGAAASATRTTAIGSNSHASATGAVAAGADSSASGVNSSAIGRQTNAI
GENAVAIGYNSFVRQSGENGVALGANAGVTGANSVALGAGSRTHEDDVVSVGSGNGRGGP
ATRRITNVSAGVNAADAVNLAQLQDVADVADETATFFKATPGEDSVGAYVEGDSALAAGD
AANAVGTATTALGTGANAVADNATAVGANALASGRNSAAFGHNAQANGAGSVAVGGAAVD
EDGQPLITNGGVPVETGATSASVGGTAVGASANADGFAASSFGVGAYAAGAQSSAFGAVA
NATGDYATAVGTQTSASGTSSTAVGGPVDLIPGLGFFVQTQASGEASTALGAGAIASGTY
TTAVGTLSEASGTEATAVGYFAYAPGEGATAVGPESWASGELSTALGYYSTARGANSVAL
GANSVATRANTVSVGAAGDERQITSVAAGTEGTDAVNLDQLSAVSEVADTTARTFVATGD
GTAIAEGIDSVAAGSNASATGDYSAAFGSTSSATAQGTTAIGSGAIAAVDNATALGFNST
AVADYATALGADSSASGEFGTAIGGASLATGSGATALGYESIANGADSTALGAGSVAFGD
TSTAVGGASVAFGEDSAAFGSNAAAGGTASTAIGAGSSAFGERTVALGGSSNASGDDSVA
LGSSSQASALGTTAIGNNANASIANATAVGFNSSAGDDYATALGADSNASGYFGTAVGGT
SIANGRGATAIGYESIGNGTASTALGFASVAWGNGATAIGTESLAYGDDSTALGPNAFAA
DTGSLAAGTYANAYGRHAISIGGESDAFADNSIALGWEAIAEGTQSVSIGNGALASADNS
VALGAGAVADRANTVSVGNAGGERQITNVAAGAEGTDAVNLDQLNAVGETAETTARLYTG
TGAGTADAQGEDATAAGSNATAEGDYSSAFGSSSQAIGTGALAVGSGASATAQFATASGY
NAAASGFGSVSTGAYSQASGDYAVAVGGESAAAGAQSTALGAAADASGDGSLAAGALSVA
NGSETTALGYFASASGDSATAVGAESIADGTSAAAFGFGAEASANYSTALGGYSSATGFN
STALGNFSTASGSSSVAVGGDATASGTYSLAAGQGSVASGYNSVSVGGALLGLLPTEASG
DFSTALGGAAWAPGLNSTALGNFAESTGESSVALGADSVADRDFAVSVGSTGNERQITNV
AAGTQGTDAVNLDQLTAVAETAESTSKYFKASGSDDSDAGAYVEGDNALAAGEGANATGT
GTTALGAGAQAVADNATALGVSALASGIGAAALGNNAQATGENSSAIGSNALASDSGATA
NGAGAQAISTYTTALGSEAVASDNQATAVGFRSASSNVGSTALGGYSESSGRLSSALGYG
AVASSDYSTAVGAAALASGASAVAVGEFSEATGEESVAVGGSTFFGFIPARASGTGAAAF
GAGAWATADYTTAIGWNSYADGVNATALGQSAAALADNTLALGGGSRADAIGASVVGVDA
SATGINSTGVGRQVNVIGENAVAVGYNAFVRQSAVNGVALGANAGATGADSVALGSGSRT
YEADTVSIGSGNGRGGPATRRIVNVSDGQAATDAVNKGQLDSLAADVQTTNGMVQTTGEG
VASATGDRSSAVGAGASASGARSVAIASGSRASATGASALGVDSSASGVNSTAMGRQTNS
IGENGVALGYNSFVRQSGSNAVALGANAGASGADSVALGSGSRTYDANVVSVGSGDGRGG
PATRRIVNVGSGAIATASTDAINGGQLFQSLSNAASFLGGGAAIGAQGVFVAPTYVIQGA
SYNNVGAALTALDSKVNELDARGGTATASTAARTASLRTASVPAVAAAAATAQIDAAAVV
ADATASVQGTPTAAVVGSITPAATSTAVGTAAVANHVTGTAIGGSAYAHGPNDTAIGSNA
RVNADGSTAVGANTQIAAVATNAVAMGEGAQVSAASGTAIGQGARASAQGAVALGQGSVA
DRANTVSVGSVGGERQVANVAAGTRATDAVNKGQLDNGVAAANSYTDSRYSAMADSFESY
QGDIEDRLRRQNRRLDRQGAMSSAMLNMSASVAGIASQNRVGAGVGFQNGESALSVGYQR
AISPRATVTVGGALSGDDSSIGVGAGFGW
NT seq
6570 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggatttatcgcaaggtctggaacaaagcgttaggcgtgtgggccgtggcatcg
gaactggccagcggtgacagcccgggtgcagtgaccactgccgcattcatcgaccgccgc
cagagccgttgcctggtcgccgcgatcgctctggcgctgggtagcgccgggatcgccatt
cctctttccgcgatggcgcagtcggtcgaagtcggcgacggcgcagcggcatccgctacc
aggaccaccgccatcggcagcaacagccatgcaagcgccaccggcgccgtggcagccggc
gccgatagcagcgccagcggtgtgaacagcagcgcgatcgggcgccagaccaatgccatc
ggcgagaacgcggtggccatcggctacaacagtttcgtgcgccagagcggcgaaaacggc
gtggcgctcggcgccaatgctggcgtgaccggtgccaactcggtggcgctgggcgcaggc
tcgcgtacccacgaagacgacgttgtatcagtgggcagcggcaatggacgcggcggcccg
gccacgcgccgcatcaccaatgtcagcgccggcgtcaacgccgccgacgcggtcaacctg
gcgcagttgcaggacgtggccgatgtggccgacgaaaccgcaacattcttcaaggcaacc
cccggcgaagacagcgtcggcgcgtatgtcgaaggcgacagcgcactggctgccggcgat
gcggccaatgcggtgggcacggcgacaaccgcgttgggaaccggtgccaatgccgtggcc
gacaacgccaccgccgtgggcgccaatgcgctcgcctccggtcggaacagcgcagcattc
ggccacaacgcacaggccaatggcgcgggcagcgtggccgttggcggcgctgcggtggac
gaagatggccagccgctgatcaccaacggcggggtgccggtggagaccggcgccaccagc
gccagcgtcggtggaaccgcagtgggcgccagcgccaatgccgatggatttgctgcatcg
tcgttcggtgtcggtgcgtatgccgccggtgcgcagtcttccgcgttcggtgcggttgcc
aatgcgaccggcgattacgccaccgcggtgggcacgcagaccagcgccagcggcaccagc
agcactgcggtcggcggtccggtcgatctgattccgggcctgggtttcttcgtacagacc
caagccagcggcgaagcgtccaccgcgctcggcgccggtgcgatcgcgtcgggtacctac
accacggcggtgggcacgctcagcgaagcctccggcaccgaagccacggcggtgggttac
ttcgcctacgcacctggcgaaggcgccactgcggttggcccggaatcctgggccagcggt
gaattgagcacggcgctgggctattacagcaccgcacgcggcgcaaattcggtcgcgttg
ggtgccaactcggtggccacgcgtgccaataccgtgtcggtcggcgcggccggcgatgag
cggcagatcaccagcgtcgctgccggcaccgaaggcacagatgcggtgaatctcgatcag
ctctctgccgtgtccgaggttgccgacaccaccgcgcgcacgttcgtcgccacgggtgac
ggcaccgcgattgccgaaggcatcgacagcgttgcggccggttccaatgcatcggcaacc
ggcgactacagcgctgcattcggttcgaccagctccgcaacggcgcagggcaccactgcg
atcggtagcggcgcgatcgccgctgtcgataatgcaaccgcgctcggtttcaacagcact
gcagtggccgattacgccactgcgctcggcgctgacagtagcgcatcgggcgagttcggc
acggcgattggcggcgccagtctggcaaccggcagcggcgccaccgcgctcggttacgag
agcatcgccaacggtgccgattcaaccgcgctgggtgcggggagcgtggcgtttggcgac
accagcaccgccgtcggcggagcgagcgtggcgttcggcgaggacagcgctgccttcggt
tccaatgccgctgccggcggtaccgcatccaccgccattggtgctggcagcagtgctttc
ggtgagcgcactgtcgcgctgggcggatccagcaatgcgtcgggcgatgacagcgttgcg
cttggttcgagcagtcaggcgtctgcgttgggcaccactgcgatcggcaacaacgccaac
gccagcatcgccaatgccaccgcagtcggtttcaacagcagcgccggcgacgattacgcc
actgcgcttggcgccgacagcaatgcctcgggttacttcggtactgctgttggcggtacc
agcatcgccaatgggcgtggcgcgaccgcgatcggttacgaaagcatcggcaacggcact
gcatcgaccgcgctgggctttgccagtgtggcgtgggggaatggcgcaacggcaatcggt
actgaaagtcttgcctacggcgacgacagcactgccttgggcccgaatgcatttgcagcc
gatactggatcgctcgcagccggtacctatgccaacgcttacggccgccatgcgatctcc
attggcggtgaatccgatgcctttgccgataacagcatcgcattggggtgggaagccatt
gctgagggcacgcagagcgtgagcatcggcaacggcgccctcgcgtctgccgacaacagt
gtggcactgggtgcaggtgcggtcgccgatcgcgccaacacggtgtcggtgggcaacgcc
ggtggcgaacgtcagatcaccaatgtcgccgccggtgccgagggcaccgatgcggtgaac
ctggaccagctcaacgcggtcggtgagaccgcagaaaccaccgcgcgtctgtacaccggc
accggcgccggcacggccgatgcgcagggcgaagacgccactgctgccggttccaacgcc
actgccgagggcgattacagcagcgcgttcggttccagcagtcaggcgatcggtaccggt
gccttggcagtgggcagcggcgccagcgccactgcgcagtttgccactgcatcgggctat
aacgcggcggccagcgggtttggcagcgtgtccaccggtgcctacagccaggccagcggc
gactatgcggtagcggtgggcggcgagagtgcagcagcgggtgcgcagagcaccgcgttg
ggtgcagcggcagatgcgtctggcgatggatcgctggcggccggtgcgttgagcgttgcc
aatggcagcgaaaccacggcactgggttacttcgccagcgccagtggcgactcggccacg
gcagtcggcgcagaaagcattgccgatggcaccagcgcggccgccttcggcttcggcgcc
gaggccagcgccaattactccaccgcactgggcggctattccagcgcgaccggtttcaac
agcaccgcgctgggtaatttcagcaccgccagcggctccagcagcgtggcggtgggtggc
gatgcaaccgcatcgggcacctacagtctggcggccggccagggcagtgtggccagcggc
tacaacagcgtgtcggtcggtggcgcattgctcggcctgttgccgaccgaagcctccggc
gacttttccaccgcactcggcggcgccgcatgggcaccgggcctcaacagcactgcgctg
ggcaattttgccgaatccaccggcgaaagcagcgtggcgctgggcgccgattcggtggcc
gatcgcgatttcgcagtgtcggtgggcagcaccggcaacgaacgtcagatcaccaacgtg
gcggccggtacgcaaggcaccgatgcggtgaatctggaccagctcaccgcagtggccgaa
accgctgaatccaccagcaagtacttcaaggccagcggcagcgatgacagcgatgccggt
gcctacgtggaaggcgacaatgcattggctgcaggcgagggcgccaatgccaccggcacc
ggtaccaccgcattgggtgcaggcgcgcaagcggttgccgacaacgcaacggcgctcggc
gtaagcgccttggccagcggaatcggcgcagcggcgctgggcaacaatgcccaggcgact
ggcgaaaacagcagcgccatcggcagcaatgcgttggccagcgacagtggcgccaccgca
aacggtgccggcgcgcaggcgatttcgacctacaccaccgcactcggcagcgaggcggtg
gcctccgacaaccaggcaaccgcggtcggtttccgcagtgcttcttccaacgtcggcagc
accgccttgggcgggtatagcgagtccagcggcaggctgtcgtcggcactgggctatggc
gcggttgcgtccagcgactacagcacggcagtcggtgccgcagcgctggcctctggtgcc
agcgccgtggcggtgggtgaattcagcgaagccaccggcgaagaaagcgtggccgtcggt
ggcagcacgttcttcgggttcatcccggcgcgtgcttccggcaccggcgctgctgcattc
ggtgcgggtgcatgggccacggccgactacaccaccgcgatcggctggaattcgtatgcc
gatggcgtcaacgccaccgcattgggtcaaagcgccgcagcactggccgacaacacgctg
gcattgggtggcggcagccgtgccgatgcgatcggtgccagcgtcgtcggtgtggacgcg
tcggcgaccggcatcaacagcaccggtgtcggtcgtcaggtcaatgtgatcggcgaaaac
gcggtggcggtgggctacaacgcgttcgtgcgccaaagcgcggtcaacggtgtggcgctc
ggtgccaatgccggcgcaaccggtgccgattcggtggcgttgggctcgggttcgcgcacc
tacgaagccgacacagtgtcgatcggcagcggcaatggccgcggcggtccggcaacgcgc
cgcatcgtcaatgtcagcgacggccaggccgccaccgatgcggtcaacaagggccagttg
gattccctggcggccgatgtgcagaccaccaatggcatggtgcaaaccaccggcgaaggc
gtggcctcggcaaccggcgatcgcagcagtgcggtcggtgcaggcgccagcgccagcggg
gcgcgcagcgttgccattgcctccggcagccgggcgtcggcgaccggtgccagtgcgctg
ggtgtggacagcagtgccagcggcgtcaacagcaccgcaatgggccgtcagaccaattcc
atcggcgaaaacggcgtggcgctgggctacaactccttcgtgcgccagagcggcagcaat
gcggtcgcactcggtgccaatgccggtgccagcggcgccgattcggtggccttgggctcc
ggttcgcgtacctatgacgccaatgtggtgtcggtcggcagcggcgatggccgcggtggt
ccggccacgcgtcgcatcgtcaacgtgggcagcggcgcgatcgccactgccagcaccgat
gcgatcaacggcgggcagttgttccagtcgctcagcaatgcggccagctttctgggcggt
ggtgcggcgatcggtgcgcaaggcgtgttcgttgcgccgacctatgtgattcaaggtgcc
agctacaacaacgtcggtgctgcactgaccgcgttggacagcaaggtcaacgagctcgat
gcacgtggtggtaccgcaacggccagcacggccgcacgcacggcgtcgctgcgcactgca
tcggtgcctgcggttgcggcggctgcggcgactgcgcagatcgatgctgcagctgtggtc
gcagatgccacggcaagcgtgcagggcacgccgaccgcagcagtggtcgggagcatcacg
ccggccgccacgtccactgcagtgggcacggcggcagtggccaaccacgtgaccggtact
gcaatcggcggcagcgcgtatgcgcatggccccaacgacactgcgatcggcagtaacgca
cgcgtcaatgccgatggcagcacggcggtgggcgccaacacgcagattgcggcagtggcg
accaatgcagtggcgatgggcgaaggcgcgcaggtcagtgcggcatcgggcacggcgatt
ggccagggcgcacgtgccagtgcacagggtgcggttgcactcggccagggttcggtcgcc
gatcgtgccaacacggtgtcggtgggcagcgtcggcggcgagcgccaggtggccaatgtg
gcggccggtacgcgtgccaccgatgcggtcaacaagggccagctggacaacggcgttgcc
gctgccaacagctacaccgacagccgctacagcgcgatggccgacagcttcgaaagctac
cagggcgatatcgaagaccgcctgcgtcggcagaaccgtcgcctggatcgtcagggcgcg
atgagctcggcgatgttgaacatgtccgccagcgtggccggtatcgcctcgcaaaaccgc
gtcggtgccggcgtcggtttccagaacggcgaatcggcgttgtcggtggggtatcagcgt
gcgatcagcccgcgcgccacggtgacggtcggcggcgcactcagcggcgacgacagctcg
atcggcgtgggtgccggtttcggctggtaa
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