Xanthomonas hortorum pv. gardneri: BI317_04900
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Entry
BI317_04900 CDS
T04668
Name
(GenBank) hypothetical protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
xga
Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xga02000
]
BI317_04900
Transporters [BR:
xga02000
]
Other transporters
Pores ion channels [TC:
1
]
BI317_04900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
APP83616
LinkDB
All DBs
Position
1102943..1104145
Genome browser
AA seq
400 aa
AA seq
DB search
MRKTLSAVIWVPLLLAGCGRGEGQKSAADAAGAMPPAAETAARASDAPPATDEAVPEFPA
IPLIVVPDIAGVTPAQRALEASLQDILDPIEGVSVAPARCGDGGTLIDDAGITSVDANGN
LLRNGDGGLFDLKADGSGTANFDGGLISVNADGSGTINASGAGGDDAIIQVQANGAGSYN
GPAGLISLDAKGAGTWNSDKSGLVNNHGDGSGTWNGPRGLITINADGSGTWNGPDGLVQN
RGDGTGTVGTPPREVRMPPLPKVPPAGRFPLLQKFAPPGAPCGYLITLNERILFDFDKAG
IRPDAARVLDVLAAALGKVNTKDMQVRGHTDAKGSNAYNQALSERRADAVLAALRTRGAA
QSAGAKGYGESQPVAPNTLNGQDNPGGRQLNRRVEIFLRT
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagacgctgtcggcagtgatctgggtgcccttgctgctggccggttgcggccgc
ggcgaaggtcagaagagcgcggcagacgctgcgggcgcaatgccgccggcagcggagact
gcagcgcgtgcatccgatgcgccgccggccaccgatgaggcggtgcccgagttcccggcc
atcccgttgatcgtggtgccggacatcgccggcgtgaccccggcgcaacgcgcgctggaa
gcctcgctgcaggacattctcgacccgatcgaaggcgtcagcgtggcgccggcacgttgc
ggcgatggcggcaccctgatcgacgatgccggcatcaccagcgtcgatgccaacggcaat
ctgctgcgcaacggcgacggcgggctgttcgacctcaaggccgacggcagcggcaccgcc
aacttcgacggtggcctgatcagcgtcaacgccgacggcagcggcaccatcaatgcgagc
ggcgccggtggcgacgacgcaatcatccaggtgcaggccaacggtgccggctcctacaac
ggcccggccggtctgatcagcctggacgccaagggtgcggggacctggaacagcgacaag
agcggcttggtcaacaatcacggcgatggcagcggcacctggaatggcccgcgcggcctg
atcaccatcaacgccgacggttcgggaacctggaacggcccggacgggctggtgcagaac
cgcggcgatggcaccggcacggtcggcacgccgccgcgcgaagtacgcatgccgccgctg
ccgaaggtgccgcctgccgggcgctttccgctgctgcagaaattcgcacctcccggtgcg
ccgtgcggctatctgatcaccttgaacgagcgcatcctgttcgacttcgacaaggccggg
atccgccccgatgccgcgcgcgtacttgacgtgctggccgccgcactcggcaaggtcaac
accaaggacatgcaagtgcgcgggcataccgacgccaagggcagcaacgcctataaccag
gcgctgtccgagcgccgcgccgatgcagtactggccgcgttacgcacacgcggtgccgcg
cagtcggccggcgcaaagggctacggcgaatcgcagccggtagcgccgaatacgctcaat
ggacaggacaaccccggcgggcgacaactcaatcggcgtgtggaaatctttctacgcacc
tga
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