Xanthomonas hortorum pv. gardneri: BI317_06370
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Entry
BI317_06370 CDS
T04668
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
xga
Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xga03032
]
BI317_06370
03036 Chromosome and associated proteins [BR:
xga03036
]
BI317_06370
03400 DNA repair and recombination proteins [BR:
xga03400
]
BI317_06370
DNA replication proteins [BR:
xga03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BI317_06370
Chromosome and associated proteins [BR:
xga03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BI317_06370
DNA repair and recombination proteins [BR:
xga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BI317_06370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Lmo2446-like_N
DUF2267
Motif
Other DBs
NCBI-ProteinID:
APP83871
LinkDB
All DBs
Position
1374848..1375120
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIDGVAAAADISKAEAGRAVDAVVSEITKALKKGEAVTLVGFGTFQVRERAERTG
RNPKTGDSIKIAASKNPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaccgaattgatcgatggcgttgccgctgccgctgacatctccaaggctgaa
gccggccgtgctgtcgacgcggttgtgagcgaaatcaccaaggcactgaagaagggcgaa
gccgtcaccctcgtcggctttggtaccttccaggtccgcgagcgcgctgagcgcaccggc
cgcaatccgaagaccggcgacagcatcaagatcgcggcttcgaagaatcctgcgttcaag
gctggcaaagccctgaaggatgcagtaaactaa
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