Xanthomonas hortorum pv. gardneri: BI317_06480
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Entry
BI317_06480 CDS
T04668
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
xga
Xanthomonas hortorum pv. gardneri
Pathway
xga03030
DNA replication
xga03430
Mismatch repair
xga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BI317_06480
03430 Mismatch repair
BI317_06480
03440 Homologous recombination
BI317_06480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xga03032
]
BI317_06480
03400 DNA repair and recombination proteins [BR:
xga03400
]
BI317_06480
Enzymes [BR:
xga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BI317_06480
DNA replication proteins [BR:
xga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BI317_06480
DNA repair and recombination proteins [BR:
xga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BI317_06480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_14
AAA_18
PIF1
AAA_7
Mg_chelatase
nSTAND3
AAA_19
TsaE
AAA_2
AAA_lid_RFC1
SKI
Motif
Other DBs
NCBI-ProteinID:
APP83886
LinkDB
All DBs
Position
1388940..1391009
Genome browser
AA seq
689 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCETGTSADPCGTCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKF
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
DQIQGQMTRILAAEQIESDPSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRTM
LGTVDRTQVGAMLQSLADGDGARLLQVVAALAEFSPDWSGVLEALAEALHRIQVQQLVPS
VAFVGDGIDPTAYAAQLRPEVVQLWYQMALNGRRDLYLAPSPRAGFEMAVLRMLAFRPAA
AVPAGGADDGRGAGAGSGAHSAAAGGQIAAPVAAVPAAVAKQAAAKHAEVIEAMPAAVAA
DVTRPAPTAPAVAVVATAPAPVVVLTAPAASSDASPSAPPARNDDTPPWAMDDAPVRAKS
APVSASPAVSAPEAAMAASAAVVAAQPVAVAPEAAVAPPVAAVAPALAADAAPAVATPSV
TAVSAASPTSDPSVLLDDGQIADAEQWLELVTRSGLNGPSRQLAANAAFVSHRDGVLRLA
LAPGFEYLNSERSIANLAQALAPELGNTPRIVIETGSADVDTLHERANRQKGERQSAAET
AFMNDPNVQQLIQQQGARVVPDSIRPYDE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcttgttctcgcccgcaagtggcgcccgaagcgttttgccgaactcgttggc
caggaacatgtggtccgcgcgctcagtaacgcgctcgacagtgggcgcgtgcaccacgcg
tttctgttcaccggcacccgcggcgtgggcaagaccaccatcgcgcgcatcttcgccaag
tcgctcaattgcgagaccggcaccagtgccgatccgtgtggcacgtgcccggcctgtctg
gatatcgatgccggccgctatatcgacctgctggaaatcgacgccgcctccaacaccggc
gtggacgatgtgcgcgaggtgatcgagaacgcgcagtacatgccgtcgcgcggcaagttc
aaggtctatctgatcgacgaagtgcacatgctctccaaagcggcgttcaacgcgctgctc
aaaaccctggaagagccgcccgaacacgtgaagtttctgctggccaccaccgacccgcag
aagttgccggtgacggtgctctcgcgctgcctgcagttcaacctcaagcggctggacgaa
gatcagatccagggccagatgacccggatcctggccgccgagcagatcgaatcggatccg
tcggcgatcgtgcagctgtccaaggccgccgatggctcgttgcgcgatggcttgtcgctg
ctcgaccaggccatcgcctatgccggcggcgcgttgcgcgaggacgtggtgcgcaccatg
ctcggcacggtcgaccgcacccaggttggcgcgatgctgcagtcgctggccgatggcgat
ggcgcgcgcctgttgcaggtggtcgccgcgctggccgaattctcgcccgactggagcggt
gtgctggaggccttggccgaggctttgcaccgcatccaggtgcagcagctggtgccgtcg
gtggcatttgtcggcgatggcatcgacccgaccgcgtatgccgcgcagttgcggccggaa
gtggtgcagctgtggtaccagatggcgctcaacgggcgtcgcgatctgtatctggcgccg
agcccgcgcgccggtttcgagatggcggtgctgcgcatgctcgctttccgtcctgcagcg
gcggtgccggctggtggcgctgacgacggacgcggtgctggcgccggtagcggtgcgcat
tcggcagcagctggcggtcagattgctgcaccggtcgcggcggtgcctgctgcagtcgcg
aagcaggcagcggccaagcatgccgaggtgattgaagcgatgccggctgccgttgcggcg
gacgtgacgcgtccggcgcccacggctcccgcagtcgcagtggtcgctacagcgcctgca
ccggttgtcgtcctgactgctccggcggcctcttccgatgcttcgccgtcagcccccccc
gcgcgcaacgacgacacgccgccctgggcgatggacgatgcgcccgtgcgtgcgaaatct
gcgcccgtctccgcgtcgcccgctgtgtccgcgccggaagctgcaatggcagcttctgca
gcagttgtggctgcacaacctgtcgcggttgcgcccgaagcggcagttgcgcctccggtg
gctgctgtggcaccggcgctcgccgcggatgcagcgccggctgtggcgacaccctcagtg
actgccgtatccgcagcatcgccaacatccgatccatcggtcctgctcgacgacggccag
attgccgacgccgagcaatggctggagctggtcacccgcagcggcttgaacggcccttcg
cgccagcttgcggccaatgctgccttcgtcagtcatcgcgatggcgtgctgcgtctggcg
ctggcgccgggctttgaatatctgaactccgaacgttctatcgccaaccttgcgcaagcg
ctcgcgcccgagttgggaaacaccccgcgcatcgtcatcgaaaccggcagtgccgatgtc
gataccctgcacgagcgggccaaccgccagaaaggcgagcgccagagcgcggccgaaacc
gccttcatgaacgacccgaatgtgcagcagctgattcagcagcagggcgcgcgggtcgtc
cccgattccatccgcccttacgacgagtaa
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