Xanthomonas hortorum pv. gardneri: BI317_07785
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Entry
BI317_07785 CDS
T04668
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
xga
Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xga03009
]
BI317_07785
Enzymes [BR:
xga01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BI317_07785
Ribosome biogenesis [BR:
xga03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BI317_07785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
PCMT
RrnaAD
Cons_hypoth95
Methyltr_RsmB-F
Methyltransf_11
TRM5-TYW2_MTfase
TRAM
Methyltransf_23
Methyltransf_15
Methyltransf_12
UPF0020
PrmA
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
APP84102
LinkDB
All DBs
Position
1699162..1700496
Genome browser
AA seq
444 aa
AA seq
DB search
MARTRNRFDRTPFQTAIIDLSHDGRGVARREGEGGKVTFISGALPGEVVHAEPTARSRHF
DEAKTVEVLEASPQRVTPRCPHFGVCAGCVLQHLDESQQIVAKQRVLMDNLERIGHVTPQ
AILPALVGDNWGYRRKGRFSVRRVEKKDKTLVGFRELDPRFVADLSVCYTVIPQIGEKIP
LLAALVEGLDGKRDIPQIEFIAGDEAVVLTIRHMQPLSERDLQALTEFAQAHDFAIFLQP
GGVESVHPLWPQQVPLSFRLPQWDVELAFRPLDFIQVNASLNQKMIAHALALLDARPEDR
VLDLFCGLGNFTLPLARGVREVVGVEGDAGLVARARENAQRNGLDNAQFHAADLTQDQRH
AAWMRQGFDKLLLDPPRSGALEVLQQLPLKKFERIVYVSCHPGSLARDAGYLVNEQGFTL
KAAGAMDMFPHTAHVESIAVFERR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtggccagaaccagaaaccgtttcgaccgtaccccgttccagaccgccatcatcgacctc
agtcacgacggccgcggtgttgcccgccgcgagggcgaaggcggcaaggtcaccttcatc
agcggcgccctgcccggtgaggtggtgcatgccgaacccaccgcgcgcagccggcatttc
gatgaggccaagacggtggaggtgctggaggcatcgccgcaacgggtgaccccgcgctgc
ccgcatttcggcgtctgtgccggctgcgtgctgcagcatctggacgagtcgcagcagatc
gtggccaaacagcgtgtgctgatggataacctggagcgcatcggccacgtcaccccgcag
gcgatcctgccggcgttggtgggcgacaactggggctaccgccgcaagggtcgcttctcg
gtgcggcgggtggaaaagaaggacaagacgctggtcggtttccgcgagctcgatccgcgc
ttcgtggccgatctgtcggtctgctacacggtgatcccgcagatcggcgagaagattccg
ttgctggccgcgctggtcgaaggtctggacggcaagcgcgacatcccgcagatcgaattc
attgccggtgacgaggcggtggtgctgaccatccgccacatgcagccgctcagcgagcgc
gatctgcaggcgctgacggaatttgcgcaagcgcatgattttgcgatcttcctgcagccg
ggcggcgtggagagcgtgcatccgctgtggccgcaacaggtgccgctgtcgttccgctta
ccgcagtgggacgtggagctggcgttccggccgctggacttcatccaggtcaacgcctcg
ctcaaccagaaaatgattgcgcatgcactggcattgcttgacgccaggcccgaggaccgc
gtgctggatctgttctgtggattgggcaatttcaccctgccgctggcacgcggcgtgcgc
gaagtggtcggcgtggaaggcgatgccgggctggtggcgcgtgcgcgcgagaatgcccag
cgcaatggtctggacaacgcgcagtttcatgcggccgacctgacccaggatcagcgccat
gccgcgtggatgcggcagggcttcgacaagctgctgctggatccgccacggtcgggtgcg
ttggaagtgctgcagcagctgccgttgaaaaagttcgagcgcatcgtctacgtaagctgc
catccggggtcgctggcgcgcgacgccggctatctggtcaacgagcagggctttacgctc
aaggccgccggtgcgatggacatgtttccgcatacggcgcatgtggaaagcatcgcggtg
tttgagcggcgctag
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