Xanthomonas hortorum pv. gardneri: BI317_08695
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Entry
BI317_08695 CDS
T04668
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
xga
Xanthomonas hortorum pv. gardneri
Pathway
xga03030
DNA replication
xga03430
Mismatch repair
xga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BI317_08695
03430 Mismatch repair
BI317_08695
03440 Homologous recombination
BI317_08695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xga03032
]
BI317_08695
03400 DNA repair and recombination proteins [BR:
xga03400
]
BI317_08695
Enzymes [BR:
xga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BI317_08695
DNA replication proteins [BR:
xga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BI317_08695
DNA repair and recombination proteins [BR:
xga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BI317_08695
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
APP84246
LinkDB
All DBs
Position
1888928..1889956
Genome browser
AA seq
342 aa
AA seq
DB search
MELRPEQLAGQSNQPLQPVYLIAGPETLRVLEAADAVRARARAEGISEREVFDADGREFD
WNQLDATFNAPSLFSPRRLVEIRLPSGKPGKDGADVITRFCANPPPDVVLLITANDWSKA
HQGKWADAVGRIGTISVAWAIKPHELSDWIERRLRSHGLRADAAAVQRLSERVEGNLLAA
AQEIDKLVLLADGKVLDLEAMESLVADAARYDVFRLAETTFSGQPAAVIRMLAGLRAEGE
AVAALMPILIKELLRTASLAKVQANGGNLAAEMKAQGLWESRQAPFKRALQRHPEPRRWE
RFVAEAGLVDRMAKGRADGDAWVGLERLLVAVAEARAVRLLV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaactccgccccgagcagcttgccggccagtccaaccagccgttgcagccggtctat
ctgatcgccggccccgagacgctgcgcgtgctggaggcggccgatgcggtgcgcgcccga
gcgcgcgccgaaggcattagcgaacgcgaagtcttcgacgccgatggccgcgagttcgac
tggaaccagctggatgcgaccttcaacgcgcccagtctgttcagtccgcgccggcttgtg
gaaatacgcctgcccagcggcaagccgggcaaggacggtgccgatgtcatcacccgcttc
tgcgccaatccgccgccggacgtggtgctgctgatcaccgccaacgactggagcaaggcg
caccagggcaagtgggccgatgcggtcggccgcatcggcaccatctcggtggcctgggcg
atcaagccgcacgaattgtccgactggatcgagcgccgcctgcgcagccacggcctgcgt
gcggacgctgccgcggtgcagcgcctgagcgagcgggtggagggcaatctgctcgccgcc
gcgcaggaaatcgacaagctggtactgctggccgacggcaaggtgctggacctggaggcg
atggagtcgctggtcgccgatgccgcccgctacgacgtgttccggctggccgaaaccacc
ttctccgggcagccggccgcagtgatacgcatgctcgccggcctgcgcgccgagggtgaa
gcggtggccgcactgatgccgatcctgatcaaggagttgctgcgtaccgcatcgctggcg
aaagtgcaggcaaatggcggcaacctcgccgccgaaatgaaggcgcaagggctgtgggaa
tcgcgccaggccccgttcaagcgtgcgctgcaacggcatcccgaaccgcgccgctgggaa
cgcttcgtcgccgaagccgggctggtcgatcgcatggccaaaggccgcgccgacggcgac
gcctgggtcggcctggaacgcctgctggtggccgtggccgaagcgcgtgcggtgagattg
ctggtgtga
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