Xanthomonas hortorum pv. gardneri: BI317_09230
Help
Entry
BI317_09230 CDS
T04668
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xga
Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xga03016
]
BI317_09230
Enzymes [BR:
xga01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BI317_09230
Transfer RNA biogenesis [BR:
xga03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BI317_09230
Prokaryotic type
BI317_09230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
APP86911
LinkDB
All DBs
Position
2011295..2012221
Genome browser
AA seq
308 aa
AA seq
DB search
MKPRIVYRPLHGILLLDKPAGVSSNTALQSARRLLRAEKGGHTGSLDPLATGLLPLCLGE
ATKIAGVLLGSAKAYDAEVVLGITTDTDDADGEPLRERAVPELSEDALRAALAPFIGRIA
QQAPIYSALKQGGEPLYAKARRGEIIEAPVREVDVHAIELIGYAAPRLQLRVTCGSGTYI
RSLARDLGEVLGCGAHIASLRRLWVEPFRTPQMITLEALSAALDAGTDAQELLLPIRAGL
ADFARITLDQAHTARFRMGQRLRDAAFPDGQVAVFGPDGIPLGLGLVDMEGRLSPQRLFN
GLNEAQAC
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccccgcatcgtctatcgcccgttgcacggcatcctgttgctcgacaagccggct
ggcgtcagctccaacaccgcattgcagtccgcacgccgtttgctgcgcgccgaaaagggc
ggccacaccggcagcctggatccgctggccaccggcttgttgccgttgtgtctgggcgag
gccaccaagatcgccggcgtgttgcttggttcggccaaggcctacgacgccgaggtggtg
ctgggtatcaccaccgataccgacgatgccgatggcgaaccgctgcgtgagcgtgcggtg
cccgagttgagcgaagacgccctgcgtgcggcgctggcgccatttatcggccgtatcgcc
cagcaggcaccaatctactcggcactcaagcagggcggcgagccgctatacgccaaggca
cgccgcggcgagatcatcgaggcaccggtgcgcgaagtcgatgtgcatgcgatcgaactg
atcggatatgccgcgccgcgcctgcaattgcgcgtgacctgcggttcgggcacgtatatc
cgcagcctggcgcgcgatctgggtgaggtgcttggctgcggcgcgcatatcgcctcgttg
cgccggctctgggtcgagccgttccgcaccccgcagatgatcacgctggaagcgctgtct
gcggcgctggacgccggtaccgatgcgcaggaattgttgctgccgatccgggccggattg
gccgattttgcgcggatcaccctggaccaggcacacacggcccgtttccgcatggggcag
cgcttgcgcgatgccgcatttccggatggccaggtggccgtgttcggaccggacggaatc
cccttaggcctaggcctggtggacatggaggggcggttgtcgccccagcgcttgttcaat
ggactgaacgaagcccaggcttgttaa
DBGET
integrated database retrieval system
