Xanthomonas hortorum pv. gardneri: BI317_09325
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Entry
BI317_09325 CDS
T04668
Name
(GenBank) pilus assembly protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
xga
Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
xga02044
]
BI317_09325
02035 Bacterial motility proteins [BR:
xga02035
]
BI317_09325
Secretion system [BR:
xga02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
BI317_09325
Bacterial motility proteins [BR:
xga02035
]
Pilus system
Pilus assembly proteins
BI317_09325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
APP84349
LinkDB
All DBs
Position
2029833..2033744
Genome browser
AA seq
1303 aa
AA seq
DB search
MSHRIFRTAVVSVIVFVAVGGYFIYSLIAAQGQGALAQSPLNNATSVSPAFIMAVDDSNS
MTFERIFRGGDGRLRWNGTSFFSSAGVFFNASDACTNTSADCYLYLYSHVDYNKAFTPGD
AIPPIDVFGFARSPTYNASYYNPDVLYEPWLLPAKTGATAVSWPPATFGRARVDPRDPQV
YGSDFNTGYNTIYNLGSREVDGESFQFLTGMTIAAGTRYKSNARSCNTFNNLGFPNNDGL
PSSGGNWINLTAGVRVAANCLVQISYVPATFYLPVDAPAPVGYRTNDVNRPIIANACGPG
CSLRRYQILLQNYETSPAAVIAYGNAQQNFANWFQYHRNRILAVVGSASRALAGVDKMRI
GYFTINNLAPVTMYDVFNDDERASLYGQIYRLKPSGGTPNRTAVDYLGKQFLRTGDGAPV
LRACQKNGGMLFTDGYSNINNVAAGYGNADSTGTVDFPALPFADSYENTIADIAASYYSG
ASTPLVTGQGFQAGLVPVDEKCATLSKSSSDWKRLDCQKDLHMNFYAITLGAQGNIFEVN
QAATDDPYSNAPDWNANGDPKADDDGRVIDELWHATINSRGEFINAKSPAEVAGAMRRVL
SAAGAPNSPSGTLALTGARIGAGSLTVAPEYQIKNNGTDWSSKLKATQVSVDPDTREARF
TPFWEASAQIAQMSLTARNVFFNDGNNVRKFDETTITLSGLCGLSRTLYPGQTLCLEKDL
TDLEATASTAAGYLLGDQSGEVQRNGRLRDRTTVLGDIINSAPLISSPIDDFGYRALGGT
LGTAYTSYLNSKRANQSYMVYAGANDGMLHAFDGGMNGSGSVTGSGGRERFAYIPATSYG
HMGNLLLPYQASKGVAPSFDHRYFVDGPLAVGDAYYNGGWKTTLVGTTGAGGRGAFALDI
TNPSAFGSASRLWEINDLSGDATVRSNIGHVLGKPVIVPVRAANGAVSWKAIFGNGYDSA
SGKTVLFVVDIGTSATPTVRMIEATESSNTISGRNGLGNVIVLDRVDNLTIDQTTGRPAQ
TRDGYADTVYAADLRGAVWKFDLTSTAASVTVPAFTTGTYTEGGRTYRQPITGGLQASSG
ENGGVLVLFGTGSFSFDNDSLASSVLHTQSLYGFTDQVDGVIAATLTRANLTPYSVTIAV
TGGTRTLLVGNAPATALGWYVDLPAGERFVGYPELVSGILFMPTYAPLAASSGCSTDGVN
WLFGLNPRTGVGALSGVRMGGISGSTLASGSAGISLNTGGNSPIKDVGVSVVPRLEPKVN
PKDGSAAPAVPAASGCWMVVNVAGAAPMYVPYPCGRQSWRQIQ
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatcgcatttttcgaaccgccgtcgtctccgtgatcgtttttgtcgcggttggc
ggctatttcatctacagcctgattgctgcgcaagggcagggtgctttggcgcagtctccg
ctgaataacgcgacatctgtttcgccggcttttatcatggcggtggatgactcaaattca
atgacgtttgagcgcatcttcaggggcggggatgggcgtctgcgttggaatggtactagc
ttcttcagttcggcgggtgtttttttcaatgccagcgatgcatgcacgaatacctctgcg
gattgctatctctatttgtactcgcacgttgattacaataaagcgttcactccgggtgat
gctattccacccatagatgtgtttgggttcgcaaggtcgcctacatataatgcgagctat
tataatcccgatgtactttatgaaccctggttgcttcctgcaaagacgggtgcgaccgca
gtctcttggccacctgcaacgtttggcagggcgcgggttgatccccgtgacccgcaggtg
tatggctccgacttcaatacgggatataacaccatctacaatcttggcagccgagaggtc
gatggtgaatcctttcagttccttactggaatgacgattgctgcaggaacgcgttacaag
tccaatgcgcggtcgtgtaatacattcaataatctagggtttccgaataatgatgggttg
ccgagtagcggtgggaactggataaatttgacagcgggggtccgggttgctgcgaattgc
ttagtccaaattagctacgttccagcaactttttatttgccagtagatgcgccagcccca
gtgggttatcggaccaatgatgtaaatcggccgatcatcgcaaatgcgtgcggtcctggc
tgtagtctacgccgatatcaaatattgttgcaaaattacgagacaagtccggcggctgtg
attgcgtatggaaatgcgcagcagaattttgctaactggttccagtatcaccgcaatcgt
attcttgcagttgttggatccgcgtctcgagcacttgccggtgtcgataagatgcgaata
ggttattttactatcaataacctggctccggttaccatgtacgatgtgtttaacgacgat
gagcgtgcctcgctatatggccagatttatcggctcaagccgagtggcggtacaccgaat
cgtacggcggtcgattatttgggcaagcagttcctccgaacaggggatggagccccggtg
ttgcgtgcttgtcagaaaaatggcggtatgttgtttaccgatggttactcgaatatcaat
aacgtggccgccggatatggcaatgcagattcaactgggacggtggatttccctgctctc
ccgtttgctgatagttacgaaaatacaattgccgacattgctgcgtcctactattctgga
gcatcgaccccgctggttacaggtcagggttttcaggctggcctagtgccggtggacgag
aagtgtgcaacgctttctaaaagctcgtctgactggaagcgtctagactgtcaaaaagat
ttgcatatgaatttctacgccatcacgctaggtgcgcaaggaaatatttttgaagttaat
caggctgctaccgacgatccgtattctaatgcccccgattggaatgctaacggcgaccct
aaagctgacgatgatggccgtgtcattgacgagctatggcacgctactattaatagccga
ggcgagttcattaatgccaaaagccctgccgaggtggctggagcaatgcgtcgggttcta
tcggcagccggtgcccctaattcgccgtctggcacacttgcgctgaccggggcgcgcatt
ggcgctggttccctgaccgtggcgcctgagtatcaaatcaagaacaacggcaccgattgg
tccagtaaattgaaagcaactcaagtatcggttgatcctgatacgcgggaagcccgcttc
actccgttttgggaagcttctgcgcagattgcgcagatgtcgcttactgctcgtaatgta
ttctttaatgatggaaataatgtacggaagttcgacgaaactacaattactttgagtggg
ttatgcggcttgtctcggacgctatatcccggtcagacgctttgcttggaaaaggatttg
accgatcttgaagcaacagcttcgacagctgccggctacctgttgggcgatcagtctgga
gaggttcagcggaacggcaggctccgtgaccggacaacggtacttggcgatatcatcaat
tcggcgccgttgatcagttcgccaatcgatgacttcggatatcgtgctctgggcggaacg
cttggaacagcatatacgagctacctgaatagcaagcgcgccaatcagagttacatggtg
tatgcgggggcgaatgacggcatgctgcatgcgttcgatggtggcatgaatggcagcggt
tccgtcaccggtagcggtggtcgtgagcgctttgcctacattcctgcaacttcatacggg
catatgggtaatctattgctaccctatcaggccagcaagggagttgctccgtcgtttgac
catcgctatttcgttgatggaccgctcgctgtcggggatgcctactacaacggcggttgg
aagacgacactagtgggtacgaccggtgctggtggtcgaggtgcatttgcattagatatc
actaatccaagcgccttcggcagcgctagccgcctttgggaaatcaacgatctcagtggt
gatgccacggtgcgttcgaatattggacatgtgcttggtaaacccgtcattgttccggtg
cgtgctgccaatggggcggttagctggaaggcaatttttggcaacggctatgacagtgcc
agcggcaaaacggtgctatttgtggtcgatattggaacatccgcaactccaactgttcgg
atgatcgaggcgactgagtccagtaatacaatcagtgggcggaacgggcttggcaatgtt
attgttttggatcgggtcgacaacctgacgatcgaccaaaccaccggtaggccggcccag
acgcgggatggctatgcagacacggtttacgccgccgatctccgcggtgccgtttggaag
ttcgacctcacctcaactgcggcgtctgtgaccgtgcccgcattcactactggcacttat
accgaaggtgggcggacgtaccgtcagcccattaccgggggactacaagcttcgtctggt
gagaatggtggtgtgcttgtgttatttggtaccggtagcttttcgttcgacaacgacagc
ttggctagttcggtgctacatacacaaagcttgtacggcttcactgaccaagtggatggt
gtaatcgccgcgaccctgactagggcaaacctgacgccgtattcggtcacgattgctgtg
actggcggaacgcgaaccttgctggtgggcaatgctccggcaacggcgcttggatggtat
gtagatctgcccgccggcgagagatttgtgggttaccccgaacttgtgtcgggaattctg
ttcatgccgacgtatgcgccgctcgcggcaagcagcggttgcagcactgatggcgtgaac
tggttgtttggcctcaatccgcgtactggtgtaggtgcgttgtctggcgttcgaatgggg
ggcattagcggttccacgcttgcctccggttccgccggaatctcactgaataccggcgga
aactccccgatcaaagatgtaggggtgtcggtcgtgccccggcttgagcccaaggtcaat
ccgaaggatggctcggccgcgcctgctgttcctgcagcttcgggttgctggatggtcgtc
aacgtggcgggcgccgcgcccatgtatgtcccttatccctgtggtcgccaatcctggcgc
cagattcaatga
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