Xanthomonas hortorum pv. gardneri: BI317_10180
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Entry
BI317_10180 CDS
T04668
Name
(GenBank) type IV secretion protein Rhs
Organism
xga
Xanthomonas hortorum pv. gardneri
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Motif
Other DBs
NCBI-ProteinID:
APP86929
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All DBs
Position
complement(2190926..2194978)
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AA seq
1350 aa
AA seq
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MCGSSADFSFMSARAGQISSCSTANPCHPTTGDKTRSETDFMFAGRPFSRYYHSLAQFRD
RDNPFAVGWSHSYSDYLVLTDTYSPVLIDAEGNYENFVKVDGNIYRGANSNRIMIYLNTP
EAQYRLFEASGEIRDFNRDGALLSVRNPATPSNDVTLSYIEEQLTSATEASGRKIQFNYA
LDRLRSITLPDGSLISYDYDRDSNLTAADYGDGSVKRYHYHEQGLADPKLIHHLTGITSE
DGRRYGTFNYEPNGRVIGSALESGSEQVDAVSLSYDSSTTTSVTYALGEKKIFSAGSGLY
RSLENLASEAGNDKNTYLADGRLQSKTDRAGTVTKYEYQPTYLSAIVKAAGTAQQQREEF
VRDVAKNTLLEHRIYDPKGKLRQSTVLTYNGRGQQIARTQTDAVTGVVRTSRNEYCEQAA
LDAGSCPILGLITLSDGARMDVPDTTAYTYYGSDDSSCAGAPTTCPHRKGDLWKAANALG
QVTEYLAYDGAGRPLSIKDANGNITDYSYHRRGWLTATKVRGADPASDLDDRITRIDYWP
TGLIKQVTQPDGGFTTFTYDGAHRLTDVADNAGNTVHYTLDNAGNQIKEDTRDVAGTLKR
TLSRVYNQLGQLKTQATAASDPTDFAYDAKGNTVAVNDALGTATLSEYDPLNRLARSLQD
ASGIKAETKFTYDYQGNLAKVSDPKGLGTTYEYNGFGDLTKLASPDTGVTAYTYDSAGNR
ATQTDARGVITTYGYDALNRLTKLTYPKPTDGLDISYAYDVVPTVCAAGEAFVVGRLSRM
SDASGTTEYCYNAFGDVTRKVQTSNGKVLVLRYDYTVGGQLRRMTYPDGAVVDYLRNAQG
QTTEVGVTPAGGSRQVLLSNASYYPFGPAAGWTYGNGRTLARQYDLDYRPQAIRDTRPGG
LEVGFGFDPVGNLTALTPAGNPTPEIGLGYDTLGRLTALTDGTTGTVIDGYSYDATGNRL
SAKVGGVTQVYTYPATNHRLSAVASVARTYDKAGNTLTIGGKAREFSYDASGRMSMAKRA
GALVMNYRYNGRGEQVRRFLGTTNTYTLYDEAGHWLGDYDSNGAPKQQAIWLDDLPVGLL
ANANTLHYIEPDHLGSPRVVIDPTRDVAVWTWSLKGEAFGNTEPNQDPDGDGAALVLDMR
FPGQRYDAASGLSQNYFRDYEAATGRYGQSDPIGLEGGLSSYAYVSSRPLSSVDHNGLQA
IPLPMPLPIGPPGFGEGENGMDDFGGPRLPEPTAAGVLGGLYQISKTTPGFSLLDQSLTI
ANALCPENNDELCEKAKTDARNAYFKLITKRIPQFQTGGTRGRDPGHLQAITQLQARLRD
ALRRVRMYCKPLPAEYGEWERVANLNAPGF
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggatcgagcgcggatttctcgttcatgtccgccagagcgggccagatatcgagt
tgctccaccgcaaacccgtgtcaccccaccactggtgacaagacgcggagcgaaaccgac
ttcatgttcgcggggagacccttttccaggtactaccactcactcgctcaattccgcgac
cgcgacaacccttttgcggttggctggtcgcatagctatagcgactatctggtcttaaca
gacacgtactcccccgtcttgatcgatgcggaggggaactacgaaaacttcgtcaaagta
gatggaaacatctatcgaggagcaaactcgaatcgcattatgatttatctgaatacgcca
gaggcgcagtatcgcctctttgaggcttctggtgagattcgggacttcaaccgcgacggt
gcgctgctatccgtacgaaatccggcaaccccctctaatgacgtcacgctctcttacatc
gaagaacaattgacatcggcgaccgaggcgtccggcagaaagatccaattcaactacgca
cttgatcgcctacgatccatcacacttcccgatggaagcctgatcagttatgactatgat
cgcgactcaaatcttaccgcagcagattatggcgatggcagcgtaaagcgctatcactat
cacgagcaaggtcttgccgaccctaaattgatacatcacctcaccggcatcacatcggaa
gatgggcgtcgctacggcacgttcaattacgagcccaatggccgcgtcattggtagtgct
ttggagtccggaagcgaacaggtggacgccgtctcgcttagctacgatagctcaacgaca
acaagcgtgacctatgcacttggcgaaaagaagatattcagtgcaggatccggcctgtat
cgatcgctggagaacctcgccagtgaagctggaaacgacaaaaatacttacctagccgac
ggacgcttgcaatcgaaaaccgatcgcgcgggaaccgtcacgaagtacgagtaccagccg
acatatctatccgcaatcgtcaaggctgcgggtaccgcacagcaacaacgcgaggagttc
gttcgcgatgtcgccaaaaacacactgctcgaacacaggatttacgaccccaaaggcaag
ttacgccagtccaccgttcttacctacaatggacgtggccagcaaattgcccggacacaa
acagacgctgtcaccggtgtagtgagaacctcccgcaatgaatactgcgaacaagcagct
ctcgatgcgggtagctgccccatcctggggctaatcacactgtccgatggtgcgcgtatg
gatgtaccggatacgactgcctacacctactacggaagcgacgatagttcgtgcgctgga
gcgcccacaacctgcccgcaccgcaaaggcgatctttggaaagccgccaatgcacttgga
caggtgactgagtatctcgcctacgatggcgcaggtcgtccgctttccatcaaagatgca
aacggcaacatcaccgactacagctaccaccgtcgcggctggctgaccgcgaccaaagtg
cgcggagccgatccagcgagcgacctggacgaccgtatcacacgcatcgattactggccc
acgggcctgatcaagcaagtcacgcaacctgacggcggattcactaccttcacatatgac
ggtgcgcatcgcctgaccgatgtcgccgacaatgccggtaacacggtgcattacaccttg
gataacgccggcaaccagatcaaggaagacacccgagatgtcgccggaacgctgaagcgt
acgttatcacgcgtctacaaccagcttggacaactcaagacgcaggcaacggctgcaagt
gatccgaccgatttcgcttacgatgcaaaaggcaacaccgtcgcagtgaatgacgcgttg
ggtaccgccacgctgagcgagtatgacccgctgaacaggctcgcacgcagcttgcaggac
gccagcggcatcaaggccgaaaccaaatttacttacgactaccaaggcaacctggccaag
gtcagcgatccaaagggattgggcaccacgtacgagtacaacgggtttggcgacctgaca
aaactggccagtccagataccggcgtcaccgcttacacctacgacagcgccggcaaccgc
gccactcagaccgatgcgcgtggggttatcacgacttacggctatgacgcgctcaatcgc
ctcaccaagctgacctatccaaagccaaccgacggcctggatatcagttacgcctacgac
gttgtgccgacggtctgtgcggccggcgaagcgtttgttgtcggccgcctgtcgcgcatg
agcgatgccagtggcaccaccgaatattgctacaacgcgtttggcgatgttacccgcaag
gtgcagaccagcaacggcaaagtactagtgctgcgttacgactacacggtcggagggcag
ctgcggcgcatgacctatccggatggcgcggtggtcgattacctgcgcaacgcgcagggc
cagaccaccgaagttggcgttaccccggccggtggcagccgccaggtactgctgagcaac
gccagctactatccgttcggcccggccgccggctggacctacggcaatggccgcaccctc
gcccgccagtacgatctggactatcgcccacaggctatccgggacacccgcccgggcgga
ctggaagtgggcttcggcttcgatcctgtcggcaatctcaccgcgctcaccccagcaggc
aatcccacaccagagatcggcctgggctacgacacccttggccgcctcaccgccctcacg
gacggtaccactggaacagtcatcgacggctatagctatgacgccaccggcaatcgcctc
agcgccaaggtcggcggcgtgacacaggtctacacctatccggcgaccaatcatcgcctg
agtgcggtagcaagcgtggcgcgcacttacgacaaagcgggaaatacgctgacgatcggc
ggcaaagcgagggagttctcctacgatgcatccggccgcatgagcatggccaagcgtgca
ggcgcgctggtgatgaactaccgctacaacggccgtggcgagcaggtgcgccgcttcctc
ggcaccaccaatacctacacgctctatgacgaagccggccattggctaggcgactacgac
agcaacggcgcgcccaagcaacaggcgatctggctggacgatctaccggtcggcctgctg
gccaatgccaacacgctgcactacatcgaacccgaccacctgggcagcccacgcgtggtg
atcgacccaacccgcgatgtggccgtgtggacgtggagcttgaagggcgaagccttcggt
aacaccgaaccgaatcaggatcctgatggagatggtgcagcgctggtgttggatatgcgc
tttccggggcagcggtacgacgcagcgagtgggttgagtcagaactatttccgggactac
gaggcggctacggggcggtatgggcagagcgatccgattggactagaaggtggattgagt
tcctacgcctatgtcagctctagacctctaagcagcgtagatcataacgggctgcaagct
attcctcttcctatgccgcttcccatcggacctccaggattcggagaaggagaaaatggc
atggatgactttggcggcccccgtctaccggagccgaccgcagcaggagtgcttggcgga
ctttatcaaatctccaaaacaacacctggtttttccttgcttgatcagtcgctcacaata
gccaatgcgctatgccctgaaaacaatgacgagctctgcgaaaaagcaaagacagacgca
cgaaacgcctactttaaactgatcacaaaaagaatccctcaattccaaaccggtgggacc
agaggtcgcgaccctggccacttacaggcaatcactcaattgcaagcgcgcctacgcgac
gccctaagaagggtgcgaatgtactgcaagccattaccagccgagtatggcgaatgggaa
cgtgtcgccaacttaaacgcaccaggcttttaa
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