Xanthomonas hortorum pv. gardneri: BI317_11225
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Entry
BI317_11225 CDS
T04668
Name
(GenBank) ribonuclease
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
xga
Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xga03019
]
BI317_11225
03016 Transfer RNA biogenesis [BR:
xga03016
]
BI317_11225
Enzymes [BR:
xga01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
BI317_11225
Messenger RNA biogenesis [BR:
xga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BI317_11225
Transfer RNA biogenesis [BR:
xga03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
BI317_11225
Prokaryotic type
BI317_11225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
TSC21
Pilin_N
Motif
Other DBs
NCBI-ProteinID:
APP84654
LinkDB
All DBs
Position
complement(2423567..2424016)
Genome browser
AA seq
149 aa
AA seq
DB search
MRKPALLIVAIVLLVAGLWGVRVMQTPKPQFAPQLNAPIAATAPPEQTPRQQGLPGFLPT
EAMATIVLIKRGGPFPHAQDGSVFGNREQRLPERERGYYHEYTVETPGSPDRGARRIVTG
GTPPQAWYYSDDHYQSFKSFKGPTPEQAP
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagcccgctttgctgatcgtcgccatcgtgctgctcgtcgccggcttgtggggc
gtgcgcgtgatgcagacgcccaagccgcagttcgcgccgcagctcaacgcgccgatcgcc
gcaacagcgccgcccgaacagacgcctcggcagcagggtcttccgggttttctgccgacc
gaagcgatggccactatcgtattgataaagcgcggcgggccgttcccgcatgcgcaggac
ggcagcgtgttcggcaatcgcgaacaacgcctgcccgagcgcgagcgcggctactaccac
gagtacaccgtggagacgcccggtagccctgaccgcggcgcacgccgcatcgtcactggc
ggcacgccgccgcaagcgtggtactacagcgacgatcattaccagagctttaaatcgttc
aagggccccacgccggagcaggctccatga
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