Xanthomonas hortorum pv. gardneri: BI317_11685
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Entry
BI317_11685 CDS
T04668
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
xga
Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xga03032
]
BI317_11685
03036 Chromosome and associated proteins [BR:
xga03036
]
BI317_11685
03400 DNA repair and recombination proteins [BR:
xga03400
]
BI317_11685
DNA replication proteins [BR:
xga03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BI317_11685
Chromosome and associated proteins [BR:
xga03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BI317_11685
DNA repair and recombination proteins [BR:
xga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BI317_11685
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
CDC48_2
PTS-HPr
HU-CCDC81_euk_2
VWA_3
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
APP84730
LinkDB
All DBs
Position
2518638..2518949
Genome browser
AA seq
103 aa
AA seq
DB search
MTKSELIEILAQRQAHLKSDDVDLAVKSLLEMMGQALSDGDRIEIRGFGSFSLHYRPPRL
GRNPKTGESVALPGKHVPHFKPGKELRERVSSVVPVDLADTAD
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgaattgattgaaatcctggcgcaacgccaagcgcatctgaagtcggac
gacgtggatctggcagtcaaatcgctgctggaaatgatggggcaagcgctctccgatggt
gatcggatcgaaatccgcgggttcggcagtttttcgctgcattaccgtccgccacgtctg
gggcgtaatcccaagaccggcgaatcggttgcactgccgggcaagcatgttccgcacttc
aagccgggcaaggaattacgtgagcgtgtcagctccgtggtgcccgtcgatctggccgat
acggcagattga
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