Xanthomonas hortorum pv. gardneri: BI317_11955
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Entry
BI317_11955 CDS
T04668
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
xga
Xanthomonas hortorum pv. gardneri
Pathway
xga00030
Pentose phosphate pathway
xga01100
Metabolic pathways
xga01120
Microbial metabolism in diverse environments
xga01200
Carbon metabolism
Module
xga_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
BI317_11955
Enzymes [BR:
xga01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
BI317_11955
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Paralog
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Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
APP84770
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All DBs
Position
complement(2578313..2580229)
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AA seq
638 aa
AA seq
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MSLHPNIQAVTDRIRKRSAPSRAAYLAGLDAALREGPFRSRLSCGNLAHGFAASEPTDKS
RLRGAATPNLGIITAYNDMLSAHQPFEHYPQLIRETARALGATAQVAGGVPAMCDGVTQG
RAGMELSLFSRDNIAQAAAIGLSHDMFDSVVYLGVCDKIVPGLLIGALAFGHLPALFMPA
GPMTPGIPNKQKAEVRERYAAGEATRAELLEAESSSYHSPGTCTFYGTANSNQVLLEAMG
VQLPGASFVNPELPLRDALTRAGTERALAISGLGQDFRPFGRLIDERAIVNAVVALMATG
GSTNHTIHWIAVARAAGIVLTWDDMDLISQTVPLLTRVYPNGEADVNRFQAAGGTAFVFR
ELMDAGMMHDDIPTVVEGGMRAYANEPRLQDGKVVYVPGTATTADDSVARPVSAAFESQG
GLRLLRGNLGRSLIKLSAVKPQHRTIEAPAVVIDTPQVLNKLHAAGVLPHDFVVVLRYQG
PRANGMPELHSMAPLLGLLQNQGRRVALVTDGRLSGASGKFPAAIHMTPEAARGGPIGRV
REGDIVRLDGEAGTLEVLVSAEEWASREVAPNTTVAGNDLGRNLFGINRQVVGPADQGAI
SISCGPTHQDGALWSYDAEYELGADAAAAAAPHESKDA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcatccgaatatccaagctgtcaccgaccgtatccgcaagcgcagcgcgccc
tcgcgcgcggcgtatctggccggtctcgatgccgccctgcgtgagggcccgttccgtagc
cgtttgagctgcggcaatcttgcgcatgggtttgccgcgtccgagccgaccgacaagtcg
cgcctgcgcggtgccgccacgcccaacctcggcatcatcaccgcctacaacgacatgctg
tcggcgcatcagccgttcgagcattacccgcagctgatccgcgagaccgcgcgggcgctc
ggtgccaccgcgcaggtcgccggcggtgtgccggcgatgtgcgacggcgtgacccagggc
cgtgccggcatggagctgtcgctgttctcgcgcgacaacatcgctcaggccgcggcgatc
ggcctcagccacgacatgttcgacagcgtggtgtatctgggcgtgtgcgacaagatcgtg
ccgggcctgctgatcggcgcgctggcgttcgggcatctgccggcgctgttcatgccggcc
ggcccgatgacgccgggcattccgaacaagcagaaggccgaagtgcgcgagcgctatgcg
gccggcgaagccactcgcgccgaactgctggaggccgagtcgtcgtcttaccactcgccc
ggcacctgcaccttctacggcaccgccaactccaaccaggtattgctcgaagcgatgggc
gtgcagttgcccggcgcatcgttcgtcaacccggaactgccgttgcgcgatgcgttgacc
cgcgccggcaccgagcgggcactggcgatttccggattgggtcaggacttccgcccgttc
ggccgcctgatcgacgaacgcgccatcgtcaacgccgtggtcgcgctgatggccaccggc
ggttcgaccaaccacaccatccactggattgcggtggcgcgcgcggccggcatcgtgctg
acctgggacgacatggatctgatctcgcagaccgtgccgctgctgacccgcgtctacccg
aacggcgaggccgacgtgaaccgcttccaggccgctggcggcacggcattcgtgttccgc
gagctgatggacgccgggatgatgcacgacgacatccccaccgtggtcgaaggcggcatg
cgtgcctacgccaacgagccgcggctgcaggacggcaaggtcgtgtacgtgcccggcact
gcgaccaccgccgacgacagcgtggcgcgtccggtcagcgccgcattcgaatcgcaaggc
gggctgcgtctgctgcgcggcaatctcggccgctcgctgatcaagctgtcggcggtcaag
ccgcagcaccgcaccatcgaggcgccggcggtagtgatcgataccccgcaggtgctcaat
aaactgcatgccgccggtgtgctgccgcacgattttgtggtggtgctgcgctatcagggg
ccgcgtgccaacggcatgccggaactgcattcgatggcaccgctgctcggcctgctgcag
aaccagggccggcgtgtggcgctggtcaccgacggccgtttatccggcgcctcgggcaaa
ttcccggccgcgatccacatgaccccggaagccgcacgcggcggtccgatcgggcgcgtg
cgcgaaggcgacatcgtgcgcctggatggcgaggccggcacgctggaagtgctggtctcg
gccgaagaatgggcatcgcgcgaagtcgcgccgaacaccacggtggccggcaatgacctg
ggccgcaacctgttcggcatcaaccgccaggtcgtgggcccggcagaccagggcgcgatc
tcgatttcctgcggcccgacccatcaggacggcgcgctgtggagctacgacgccgagtac
gaactcggtgccgatgctgccgcagctgccgcgccgcacgagtccaaggacgcctga
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