Xanthomonas hortorum pv. gardneri: BI317_12425
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Entry
BI317_12425 CDS
T04668
Name
(GenBank) diguanylate cyclase
KO
K14986
two-component system, LuxR family, sensor kinase FixL [EC:
2.7.13.3
]
Organism
xga
Xanthomonas hortorum pv. gardneri
Pathway
xga02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BI317_12425
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xga01001
]
BI317_12425
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xga02022
]
BI317_12425
Enzymes [BR:
xga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
BI317_12425
Protein kinases [BR:
xga01001
]
Histidine kinases
LuxR family [OT]
BI317_12425
Two-component system [BR:
xga02022
]
LuxR family
FixL-FixJ (nitrogen fixation)
BI317_12425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS_9
PAS_8
PAS_4
HATPase_c_2
PAS
DUF4118
DUF6542
Diguanyl_cycl_sensor
DUF7470
HTH_HVO_0163_N
Motif
Other DBs
NCBI-ProteinID:
APP84844
LinkDB
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Position
complement(2652593..2654032)
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AA seq
479 aa
AA seq
DB search
MDRLRLPFKWRGQVVRLNRAPTLWASLAMLALLVLAEWYSHLGVSLGLLYILPVVLAATV
LSRRNIVIAAVACAALRGLFVTEESLVEQALRFFMATIAYAGCGLLVAEISRTRRVILSH
YVQLRAEQRLRRRLERQLRLLAESSPAALLTVAGDGRIVAANRAAHEILDMTDEGGLQGR
AVRDFLPLLDDALSMSANLDGMRTSASTWGRRDDGSTFPATTWFSVYEDSEERHLAAILV
DTSEEVRARESAHFDDLLKNNRLLAGAVSHEIRNLCSAAGVVTSNLARHPAIRADPDLAA
LQSLVAALMELASFNLRRQTPHAAHETRLQTLCSELDVIIRSDWDDIDGQLVIQIPADFP
AVHGDRHALLQVLLNLARNALRAVQPLPQPRRQLIVSARMEQGSAVLSVRDTGPGIAEPG
RLFQPFRSDSDGSGLGLYISRALMSNQEGSLRYAPGGEGACFELHMPLAHAPLAETLDG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggacagactgagattgccgttcaaatggcgcgggcaggtggtcaggctcaatcgagct
cccacgctgtgggcgtcgctggccatgctggcgctgctggtgctggccgagtggtactca
cacctgggcgtatcgctcgggctgctgtacatcctgccggtggtgctggccgcaaccgtg
ctgtcgcggcgaaacatcgtcattgccgccgtcgcctgtgcggcgctacgcggcctgttc
gtcaccgaagaatcgctggtcgagcaggccttgcgcttcttcatggccaccattgcctac
gccggctgcggcctgctggtggccgagatcagccgcacccgccgggtgatcctctcgcac
tacgtgcagctgcgtgccgaacaacgcctgcgtcggcggctggagcgccagctgcgcctg
cttgccgagagcagccccgccgcattgctgactgtggccggcgatggccgtatcgtcgcg
gcaaaccgcgcagcccacgaaattctcgacatgaccgacgagggtgggctgcaggggcgc
gccgtgcgcgacttcctgccgctgctcgacgacgcgctcagcatgagcgccaacctcgac
ggcatgcgcacctcggccagcacctggggccggcgcgacgatggcagcacctttcccgca
accacctggttctcggtctacgaagacagcgaggagcgccatctggccgcgatcctggtc
gacaccagcgaagaagtgcgcgcgcgcgaatcggcgcacttcgatgacctgctcaagaac
aatcgcttgctcgccggcgccgtctcgcatgagatccgcaacctgtgctcggccgccggc
gtggtgacctccaatctcgcccgtcatccggccatccgcgccgatccggacctggccgca
ctgcaaagcctggtcgccgcgttgatggaactggcctcgttcaacctgcgccggcagaca
ccgcatgcggcgcacgagacccgcctgcagaccttgtgcagcgagttggacgtcatcatc
cgctcggactgggacgacatcgatggccagttggtcatccagataccggcggacttcccg
gccgtgcacggcgaccgtcatgcgctgttgcaggtgctgctcaacctggcgcgcaacgcg
ctgcgtgcggtgcagccgctgccgcagccgcgccgccagctgatcgtcagcgcccgcatg
gagcagggcagtgcggtgttgagcgtgcgtgacaccggcccgggcatcgccgagcccggg
cgcttgttccagccgtttcgcagcgatagcgatgggtccggattggggctctacatctcg
cgcgccttgatgagcaaccaggagggctcactgcgttatgcaccgggaggcgagggcgcc
tgcttcgagctgcacatgccgcttgcgcatgcaccactggcggagacgctggatggatga
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