Xanthomonas hortorum pv. gardneri: BI317_12840
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Entry
BI317_12840 CDS
T04668
Name
(GenBank) DNA-binding protein
Organism
xga
Xanthomonas hortorum pv. gardneri
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
HATPase_c
HisKA_3
PAS_8
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
APP84913
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Position
2751156..2753249
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AA seq
697 aa
AA seq
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MPDPVAAPAFSSAPVSRLRLAERLQQGLWTLTGLYLLTGVVWLLLGNRLLHLAGAAMPER
WSDASFLVVSSIVIHLVLRRFVALIVEEHAQLAQSEALLQAKFLALPSPALIYDLATLRI
LDANPAALEFFGWERDEFLQQTLQAIWPNADGVRLEEIITQIRAKGDDTCTLHEDLLTRS
GPRHVEIRSNQLHLASGPARLVVTVDRSEERQAQHLRDEALERLEEAQGIARLGSWQLDR
ATGLGRYSPAVYRLLGRSVPMHRREHRLEELLTASDTATQARIERMIEDMCTGGQVQIDV
LLPLTGGDSQPRTVHLRAESVTTTSGARHIHGTLQDVSEREQSRRLLREREEQFRELVRV
LPDGVLILADEHVMYANAAGSTQFGFQGETILGEPLQTLVGEHDLPIVREYLRAGSDRNE
PVSSARAMRRRDGSTFYAGLSAGDIRYGGRACKLLVVRDLSEPERMRDALAESNAELQAM
AKRLFSLQEDERRAISRDLHDDIGQAITAMKLSAHAALDELDPAARREDLLEVVSLADST
VTKLRNLSMLLRPPQLDALGLEAALRWQASMLFRASQVHLELDIQALDVRPGNEIEQACF
RIAQESLTNALRHACAGEVRMSLQTIDSQSFRLEVSDDGDGFEPEGPRGLGLIVMRERAQ
TVGGALAIESAPGAGTRVTLRLPYHPVGESVHDDGGR
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcccgttgccgcgcccgcgttttcgtccgcccccgtctcccgacttcgcctc
gccgaacgcctgcagcagggtctgtggacgctgacagggctgtatctgctgaccggtgtg
gtgtggctgcttctgggcaaccggctgctgcacctggccggcgccgccatgccggagcgc
tggtcggatgcgagctttctggtggtgtcgagcatcgtgatccatctggtgctacgccgc
tttgtcgcgctgatcgtggaagagcacgcccaactggcgcagtccgaggcactgctgcag
gccaagttcctggccctgcccagccccgccctgatctacgacctggccacgctgcgcatc
ctggatgccaacccggcagcgctggaattcttcggctgggagcgcgacgagtttctgcag
cagacattgcaggcgatctggcccaatgccgacggcgtgcgcctggaagaaatcatcacc
cagatccgcgccaagggcgacgacacctgcaccctgcacgaggatctgctgacccgcagc
ggcccgcgccatgtcgagatccgcagcaatcagctgcatctggccagcggccctgcccgc
ctggtggtcaccgtggaccgcagcgaggagcgccaggcgcagcatctgcgcgatgaagcg
cttgagcggctggaagaagcgcaaggcatcgcgcggctgggctcgtggcagctggatcgc
gccaccggcctgggccgctattcgccggcggtgtatcggttactgggccgcagcgtgccg
atgcatcgccgcgaacatcgactggaagaattgctgaccgcctcggataccgccacccag
gcacgcatcgaacggatgatcgaagacatgtgcaccggtgggcaggtgcagatcgatgtg
ctgctaccgctcactggcggcgactcgcagccgcgcaccgtgcacctgcgtgccgaaagc
gtcaccacgacgagcggcgcacgccatatccacggcacgctgcaggatgtgagcgagcgc
gaacaatcgcggcgcctgctgcgcgagcgcgaggagcagttccgcgagctggtgcgtgtg
ctacccgatggtgtgctgatcctggccgacgagcacgtgatgtatgccaatgcggcaggc
tcgacgcagttcggcttccagggcgagaccattctgggtgaaccgttgcagacgctggtc
ggcgagcacgatctgccgatcgtgcgcgagtatctgcgcgcaggcagcgaccgcaacgag
ccggtgtccagcgcacgggcgatgcgccgtcgcgatggcagcaccttttatgccggcctg
tcggctggcgatatccgctacggcgggcgcgcctgcaaattgctggtggtgcgcgatttg
agcgagcccgagcgtatgcgcgacgccctggccgaaagcaatgccgaactgcaggcgatg
gccaagcggttgttctcgttgcaggaagacgagcgccgcgcgatctcgcgcgatctgcac
gacgatatcggccaggcgatcaccgcgatgaagctatccgcacatgccgcgctggacgag
ctggacccggccgcgcgtcgcgaggatctgctcgaggtggtgtcgctggccgacagcacg
gtgaccaagctgcgtaatctgtcgatgctgttgcgcccgccacaactcgatgcactgggt
ctggaagcggcgctgcgttggcaagcctcgatgttgttccgcgcctcgcaggtgcatctg
gaactggatatccaggccctggacgtacgccccggcaacgaaatcgaacaggcgtgtttt
cgcatcgcgcaggaaagcctgaccaatgcgttgcggcatgcgtgcgcgggcgaagtgcgc
atgagcctgcagacgatcgacagccagagctttcgcctggaagtgagcgatgacggcgat
ggcttcgaacccgaaggcccgcgcggtctcgggctgatcgtgatgcgtgagcgtgcgcaa
accgtcggcggcgcgctcgcgatagaatcagcccccggagcaggcacgcgcgtgacgttg
cgcctgccctatcacccggtcggcgagtccgtccacgacgatggtggacgttga
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