Xanthomonas hortorum pv. gardneri: BI317_13960
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Entry
BI317_13960 CDS
T04668
Name
(GenBank) histone-like nucleoid-structuring protein
KO
K03746
DNA-binding protein H-NS
Organism
xga
Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xga03036
]
BI317_13960
03400 DNA repair and recombination proteins [BR:
xga03400
]
BI317_13960
Chromosome and associated proteins [BR:
xga03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
BI317_13960
DNA repair and recombination proteins [BR:
xga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BI317_13960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS
AT_hook
DUF7251
DUF6058
CRISPR_Cas9_WED
MTBP_N
Sec8_N
DUF6712
LMBR1
Ni_insertion
Motif
Other DBs
NCBI-ProteinID:
APP85100
LinkDB
All DBs
Position
complement(3021824..3022219)
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AA seq
131 aa
AA seq
DB search
MTTASLSALAAAKEKLAEEIRKLEEQEAQLRQQQSSETYSEIVKLLDQYSDHFSAKQKSE
IAALIGADVAKPKKAASMKKEVAPKYWLPHNQETWSGRGRPPKAFTIWQGSASYKEWKAK
HPDEKFPAFPG
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgcgtctttgagtgcccttgccgctgctaaagaaaaattggcagaagaaatt
cggaagttggaagagcaggaagctcagctacgccagcagcaatcatctgaaacctattca
gagatcgtcaagctacttgaccaatattccgatcacttcagtgcaaagcagaagtcggag
attgcggccctgatcggcgctgatgtggccaagccgaagaaggctgcttctatgaagaag
gaagtggcgcccaagtattggttgccccacaaccaagaaacatggtcagggcgcggtcgt
ccgcctaaggcttttaccatttggcagggcagtgcttcctacaaagaatggaaagccaag
cacccagatgagaagtttccagctttcccaggctga
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