Xanthomonas hortorum pv. gardneri: BI317_14465
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Entry
BI317_14465 CDS
T04668
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xga
Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xga03016
]
BI317_14465
Enzymes [BR:
xga01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BI317_14465
Transfer RNA biogenesis [BR:
xga03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BI317_14465
Prokaryotic type
BI317_14465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
APP85183
LinkDB
All DBs
Position
complement(3132899..3134002)
Genome browser
AA seq
367 aa
AA seq
DB search
MSDTFLLPRAHGAAVLGAAMRSTPEDFQVDELPAFEASGEGEHLLLSVRKRGQNTAYIAK
KLALWAGIAEMGVGYAGLKDRHAVTTQRFSVHLPKRIAPDIAALDDDEMQVVDSTWHNRK
LQRGALHGNRFVLTLRQVQGERDAIEQRLQAIAARGIPNWFGEQRFGRDGGNVASALAMF
GYTLDTAGALVPAPKRRLRNDQRSILLSAARSALFNRVLTARVEQGSWDTALEGEAWMLD
GSRSVFGPEPWSEVLAERLARFDIHPSGPLWGVGELRSTDQAAAVERGALSDPQSEALRI
GLEAAGLKQERRALRLRPQGLDYRWLDAQTLQVEFALPPGCYATAVLWELGEVIDAGRGM
ANVRSDT
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacctttcttctgccgcgcgcgcatggcgctgcggtccttggcgcagcaatg
cgcagcacgcccgaagattttcaggtcgatgagctgccggcattcgaagcttccggcgaa
ggcgagcacctgttgctcagcgtgcgcaagcgtggccagaacaccgcgtacatcgccaag
aaactcgcactgtgggcaggcattgcggaaatgggcgttggctacgcagggctgaaggat
cgccacgcagtgaccacgcagcgtttcagcgtgcatctgcccaaacgtatcgcgccggac
atcgctgcgctcgacgacgacgaaatgcaggtggtcgacagcacctggcacaaccgcaag
ctgcaacgcggcgcgctgcacggcaatcgcttcgtgctgacgctgcgccaggtgcagggc
gaacgcgatgcgatcgagcaacgcttgcaggcgatcgccgcacgcggcattcccaactgg
ttcggcgaacaacgctttggtcgcgatggtggcaacgtggcatcggcgttggcgatgttc
ggctacacgctggataccgccggtgcgttggtgccggcaccgaagcggcgtctgcgcaac
gatcaacgttcgatcctgttgtcggcggcgcgctcggcactgttcaatcgcgtgctcact
gcgcgcgtggagcagggcagttgggacactgcgctggagggcgaggcctggatgctggat
ggctcacgcagcgtgttcggtcccgagccgtggagcgaggtgctggccgagcgtctggcg
cgcttcgatattcatcccagtggtccgttgtggggcgtgggcgagctgcgttcgaccgac
caggctgcagcagtggagcggggcgcgttgtccgatccgcaatccgaggcgctgcggatc
ggtctggaagccgctggcttgaagcaggagcgccgcgccttgcgtctgcgcccgcaagga
ttggactaccgctggctggatgcgcagaccctgcaggtcgaattcgcactgccgccgggc
tgctacgccaccgcggtgctgtgggagctgggcgaggtgatcgacgcaggtcgcggcatg
gccaatgtccgttccgacacttga
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