Xanthomonas hortorum pv. gardneri: BI317_16280
Help
Entry
BI317_16280 CDS
T04668
Name
(GenBank) DNA methylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
xga
Xanthomonas hortorum pv. gardneri
Pathway
xga03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BI317_16280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xga03000
]
BI317_16280
03400 DNA repair and recombination proteins [BR:
xga03400
]
BI317_16280
Enzymes [BR:
xga01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BI317_16280
Transcription factors [BR:
xga03000
]
Prokaryotic type
Helix-turn-helix
AraC family
BI317_16280
DNA repair and recombination proteins [BR:
xga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BI317_16280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
RecR_HhH
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
APP85498
LinkDB
All DBs
Position
3492851..3494314
Genome browser
AA seq
487 aa
AA seq
DB search
MQTATPDRIQCDRARLARDARFDGLFFTAVRSTGIYCRPVCPAPPPKPGNISYYATAAAA
SAAGYRPCLRCRPELSPQAQQHLGEESVQRALAMIVEGALQEQPVQTLADAVGLSARQLQ
RQFVQQLGATPIQVHGTRRLLLAKQLLTETALPVTEVALAAGFNSLRRFNTAFLDGCGMP
PSALRKQRAEVPGGELTLRLGYRPPLDLPAMLAFLQRRAIPGIEQVDASGYRRVIGTPGN
ATLIDVSAAPQRAELLLRIGATDPRQIPQIVRRVRRLFDLDADLQAVHATLASEPLLAEA
IARRPGLRVPGGWDGFEVAVRAVLGQQISVAGAATLAARLVERHGGHHVDMPPGLDRIFP
TPEQLAEAPLEYLGLPRARAATLRALASACAQGRLHFGAGQRLPEFVAACTALPGIGPWT
AQYIAMRALSHPDAFPAGDLILQQVLGTPERLSERATEARSRAWRPWRAYAVLHLWHLAV
DRKDTRS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccgccacgcccgaccgaattcaatgcgaccgcgcccgcttggcgcgcgatgca
cgcttcgatgggttgttcttcaccgccgtgcgcagcaccggtatctactgcaggccagta
tgtccggcgccgccgcccaagccgggcaatatcagttactacgcgactgcggcagcggcc
agtgcggccggctaccggccatgcctgcgctgccggccggaactgtcgccgcaagcgcag
cagcatctgggcgaagaaagcgtgcagcgtgcgttggcgatgattgtcgaaggcgccctg
caggagcagccggtgcagacgctggccgatgcggtgggcttgagtgcgcgccagttgcag
cggcagttcgtgcagcagctcggcgccacgccgatccaggtgcatggcacgcgccggctg
ctgctggccaagcaactgctgaccgaaaccgcattgccggtcaccgaggtcgcactggcg
gccggcttcaacagcctgcgccgcttcaacacggcgtttctggatggctgcggcatgccg
ccatcggcgttgcgcaagcagcgtgccgaggtgccgggtggcgagctgaccttgcgactc
ggctatcggccgccgctggatctaccggcgatgctggcgtttttgcagcggcgtgcgatt
cccggcatcgagcaggtcgacgccagcggctaccgacgcgtgatcggcacacccggcaac
gcgacgctgatcgacgtcagcgcagcgccgcagcgtgcggagttgttgttgcgcatcggt
gcgaccgacccgcgccagattccgcagatcgtgcgacgcgtgcgccggttgttcgatctg
gatgcggatctgcaggcggtgcacgccacgctggcttcagagccgctgctggccgaggcg
atcgcgcgccgccccggcctgcgtgtgccaggcggctgggatggctttgaagtggcggtg
cgcgcggtactgggccagcagatcagcgtggccggtgcggcgacgctggcggcgcggctg
gtcgagcgccatggcggccatcatgtcgacatgccgccgggcctggatcgcatctttccc
acgccggaacagctggccgaggcgccgctggaatacctcggcctgccacgtgcacgtgcc
gccacgctgcgtgcgctggcatcggcatgcgcgcaaggccggctacatttcggcgccggc
cagcgcctgcccgagttcgtcgccgcctgcacggcgttgcccggcatcgggccatggacc
gcgcagtacatcgccatgcgtgcgctatcgcatccggatgcgtttccggccggcgacctg
atcctgcaacaggtgctcggcacgccggagcgcctgagcgaacgcgccaccgaagcgcgc
tcgcgggcatggcggccgtggcgcgcctacgccgtattgcacctgtggcatctcgccgtc
gatcgcaaggacacccgttcatga
DBGET
integrated database retrieval system
