Xanthomonas hortorum pv. gardneri: BI317_16310
Help
Entry
BI317_16310 CDS
T04668
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
xga
Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xga02000
]
BI317_16310
Transporters [BR:
xga02000
]
Other transporters
Pores ion channels [TC:
1
]
BI317_16310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
APP85504
LinkDB
All DBs
Position
3498579..3500645
Genome browser
AA seq
688 aa
AA seq
DB search
MHPRLASSFRRSTLTLALTSLLTPALAMAEDAPAPADPQTPPSSDTRHDATHSSGRHIKD
LDKVVVTASPLRDAAGELSRPVEVLAGERLDEVRSESLGETVSSLPGVQSSNFGPGVGRP
IIRGLDGPRVAVLRDGLSTQDVSTVSQDHSPAIEPFLANQIEVLKGPSTLLYGSGAIGGV
VNVVDGRIAETPVDGFSGRAEVRFDGGDKDGNTDMFRVDAGNGSGLSIHADGVYRNQNDY
DTPQGRQANSWIDSKVGSIGASLSGDWGFVGLSASRFRDNYGNPGEPGDLSIGERGVSLK
LQQDRYDLKGGLTDPWGEGSALRYSFGHTDYAHTEFEGEEVGTVFTKRANEGRVEASFTF
SGGWQTAFGLQGSDTTFQAVGEESFVPKTDTRSLGVFGVARNSWDRVTAELGARVDKVKY
QTDIGVDRDFTPTSFSLSGGFRFNEQWRLTANLDHAERAPAEEELFANGPHIATLAFEIG
DANLKTEKANQAELGLNFQNEWVDAKVAAYYNRYNDFVYIVDTGNQWFNAEDNDFLPIRQ
WTQADAIFHGFEGEATFHLANNDTGAWDLRVFGDTVRARLNDGGNLPRIAPGRVGAQMRW
NADQWRASLGATRTMKQDKIAVNETATDGYTFVDAHLAYHVDRGSNAWEVFLDGNNLTNQ
DARVHTSFLKDDVMLPGRSASFGVRMFF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctcgcctcgcttcctcgtttcgccgctccacgctcacgctggccctgaccagc
ctgctgacccctgccctggccatggccgaggacgcgccagccccggccgacccgcagacc
ccgcccagttcggacacgcgccacgacgccacccattccagcggccgccatatcaaggac
ctggacaaggtggttgtcaccgccagcccgctgcgcgatgcggccggcgaattgagccgc
ccggtcgaagtgctggccggcgagcgtctggacgaagtgcgtagcgagagcctgggcgaa
accgtgtccagcctgcccggcgtgcagagttccaacttcggccccggcgtcggccggccg
atcatccgtggcctggacggcccgcgcgtggcggtgctgcgcgacggcctgtccacccag
gacgtatcaacggtcagccaggatcactcgccggcgatcgagccattcctggccaaccag
atcgaagtgctgaagggtccctccaccctgctgtacggctccggcgcgatcggcggcgtg
gtcaacgtggtcgacggacgcattgccgaaactccggtggacggcttcagcggccgcgcc
gaagtgcgcttcgacggcggcgacaaggacggcaacaccgacatgttccgcgtcgatgcc
ggcaatggcagcgggctgtcgatccatgccgacggcgtgtaccgcaaccagaacgattac
gacaccccgcaagggcgccaggccaactcctggatcgactccaaggtgggctcgatcggc
gcctcgctgtccggcgactggggctttgtcggcctctcggcctcgcgcttccgcgacaac
tacggcaatcccggcgagccgggcgatctgtcgatcggcgagcgcggcgtgtcgttgaag
ctgcagcaggaccgctacgacctcaagggcgggctgaccgatccgtggggcgaaggcagc
gcgttgcgttacagcttcggccacaccgattacgcgcacaccgagttcgaaggcgaagaa
gtcggcaccgtgttcaccaagcgggcaaacgaaggccgcgtggaagcctccttcaccttc
agcggcggctggcagaccgcgttcggcctgcagggcagcgataccaccttccaggcagtg
ggcgaagaatccttcgtgcccaagaccgatacgcgctcgctcggcgtgttcggggttgcg
cgcaatagctgggatcgcgtcaccgccgaactcggcgcacgcgtggacaaggtcaagtac
cagaccgacatcggcgtggaccgcgacttcaccccgaccagtttctcgctcagcggcggt
ttccgcttcaacgaacaatggcgcttgaccgccaacctcgaccacgccgaacgcgcgccg
gccgaagaagagctgttcgccaacggcccgcatatcgccacgctggccttcgagatcggc
gatgcgaatctgaagaccgaaaaggccaaccaggccgagctgggcctgaacttccagaac
gagtgggtggatgccaaggtcgccgcgtactacaaccgctacaacgacttcgtctacatc
gtcgacaccggcaaccagtggttcaacgccgaagacaacgactttctgccgatccgccag
tggacccaggccgacgccatcttccacggtttcgaaggcgaggccaccttccatctggct
aacaacgacaccggcgcctgggacctgcgcgtgttcggcgacaccgtgcgtgcgcgcttg
aacgatggcggcaacctgccgcgtatcgccccgggccgtgtcggcgcgcagatgcgctgg
aatgccgaccaatggcgtgcctcgctcggtgccacccgcaccatgaagcaggacaagatc
gccgtgaacgaaaccgcgaccgacggctatacgttcgtcgatgcgcatctggcctaccac
gtggaccgcggcagcaatgcgtgggaagtgtttctggatggcaacaacctgaccaatcag
gacgcacgcgtgcacacctccttcctcaaggacgatgtgatgctgcctggccgcagtgct
tcgtttggcgtgcggatgttcttctga
DBGET
integrated database retrieval system
