Xanthomonas hortorum pv. gardneri: BI317_19345
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Entry
BI317_19345 CDS
T04668
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
xga
Xanthomonas hortorum pv. gardneri
Pathway
xga00730
Thiamine metabolism
xga01100
Metabolic pathways
xga01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BI317_19345
Enzymes [BR:
xga01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
BI317_19345
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
APP85993
LinkDB
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Position
complement(4228409..4230286)
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AA seq
625 aa
AA seq
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MNAAPTVLQQQAQSLSEAVTQPIPGSRKIFVQGSRADLQVPMREIALTRTPTLFGGEDNA
PLSVYDTSGPYTDPHAAIDLAAGLAPLRARWIAERGDTVALDDLSSSFGRGREHDARLDA
VRFPARHLPRVAREGANVTQMHYARRGIITPEMEFVAIRENQRLEAVTDAMLRKQHLGES
FGAAIQQRITPEFVRDEIARGRAILPNNINHPESEPMIIGRNFLTKINANIGNSAVSSGI
AEEVEKLVWSIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVDGRAEE
LTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSILAKWCLAHHKE
NFLYTHFEDICQIMKAYDVAFSLGDGLRPGCIADANDAAQFGELETLGELTKLAWKHDVQ
TMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFG
TAMLCYVTPKEHLGLPNRQDVRDGIMAYKIAAHAADLAKGHPGAQVRDNALSKARFEFRW
DDQFHLGLDPEKAKEFHDETLPKDAHKLAHFCSMCGPHFCSMKITQDVRDYAAEHGMGEA
HALSAGMEEKSVQFLAQGAQVYRAL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgcgcccaccgttttgcagcaacaagcccaatcgctgtccgaggctgtgacc
cagccgattcccgggtcccgcaagatcttcgtgcagggctcgcgcgccgacctgcaggta
ccgatgcgcgagatcgcattgacccgcacaccgacgctgttcggtggcgaagacaacgcg
ccgctcagtgtctacgacacctccggtccatataccgacccgcacgccgcgatcgatctt
gccgccggtctggcgccgctacgcgcgcgctggatcgccgaacgcggcgataccgtggcg
ctggatgacctgagttccagcttcgggcgcggccgtgagcacgatgcgcgcctggatgca
gtgcgctttcctgcgcggcacctgccgcgggtggcacgtgaaggtgccaacgtcacccag
atgcactacgcgcggcgcggcatcatcaccccggagatggagttcgtggcgattcgcgaa
aaccagcgtctggaagcggtgaccgacgcgatgctgcgcaagcagcatctgggcgaatcc
ttcggtgcggcgatccagcaacgcatcacaccggaattcgtgcgcgacgaaatcgcacgt
ggtcgcgcgatcctgcccaacaacatcaatcacccggaaagcgagccgatgatcatcggt
cgcaatttcctgaccaagatcaacgccaacatcggcaacagcgcggtgtcttcaggcatt
gccgaagaagtggagaaactggtgtggtcgatccgctggggcggcgacacggtgatggac
ctgtccaccggcaagcacatccatgaaacgcgcgagtggatcatccgcaactcgccggtg
ccgatcggcacggtgccgatctatcaggcgctggaaaaagtcgacgggcgcgccgaagaa
ctcacctgggagatctttcgcgacaccttgatcgagcaggccgaacaaggcgtggattac
ttcaccatccacgccggtgtgctgttgcgctacgtgccgctcacggccaagcgtgtcacc
ggtatcgtctcgcgcggtgggtcgatcctggccaagtggtgcctggcccatcacaaggaa
aattttctttacacccacttcgaagacatctgccagatcatgaaggcctatgacgtggcg
ttttcgctgggcgatggcttacgcccgggctgcattgccgatgccaacgatgcagcgcag
ttcggcgagctggaaacgctgggcgagctgaccaaactggcgtggaagcacgacgtgcag
accatgatcgaagggcctgggcatgtgccgatgcagctgatcaaggagaacatggacaag
cagctgcgcgaatgcggcgaagcgccgttctacaccctggggccgctgaccaccgacatc
gcgcccggctacgaccacatcaccagtgcgatcggtgcagcgatgatcggctggttcggc
accgcgatgctctgctatgtcacgcccaaggagcatctgggcctgcccaaccgccaggac
gtgcgcgacggcatcatggcgtacaagatcgccgcgcatgcggccgaccttgccaagggg
catcccggtgcgcaggtgcgcgacaacgccttgagcaaggcgcggttcgaattccgttgg
gacgaccagttccatctcggcctggatccggaaaaggccaaggagtttcacgacgaaacc
ctgcccaaggatgcgcacaagctggcgcacttctgttcgatgtgcggcccgcacttttgt
tcgatgaagatcacccaggacgtgcgcgattacgcggccgagcatggcatgggcgaagcg
catgccttgtctgctggcatggaagagaagtcggtgcagtttctcgcacagggcgcgcag
gtgtatcgcgctttgtga
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