Xanthomonas hortorum pv. gardneri: BI317_19615
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Entry
BI317_19615 CDS
T04668
Name
(GenBank) peptidase C39
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
xga
Xanthomonas hortorum pv. gardneri
Pathway
xga02010
ABC transporters
xga03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BI317_19615
03070 Bacterial secretion system
BI317_19615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xga02000
]
BI317_19615
02044 Secretion system [BR:
xga02044
]
BI317_19615
Transporters [BR:
xga02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BI317_19615
Secretion system [BR:
xga02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
BI317_19615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
SbcC_Walker_B
Zeta_toxin
DUF87
AAA_18
NB-ARC
AAA_21
GLTT
PRK
Motif
Other DBs
NCBI-ProteinID:
APP86039
LinkDB
All DBs
Position
complement(4307733..4309898)
Genome browser
AA seq
721 aa
AA seq
DB search
MSGGSASLSLLEGGSSVQDRPDLGLQGLVLLAQFHGVAADAVQLAHGFGRGGEPFDETTL
LLAAKQLGLKAKVVAQPAARIGMAALPALALVPDGDAFIVAKVGADQILIHDLVEKRPRS
ISPAEFEARYQGRLLQVASRASVLGDLAKFDFSWFIPAVVKYRKLMIEVFVVSFFIQLFA
LITPLFYQVVMDKVLVHNGLTTLDVIAIGLVSMAVFDVLLSGLRTYVFAHTTSKIDVELG
ARLFRHVLSLPLAYFESRRVGDTIARVRELENIRNFLTGQALTSVLDLFFTVVFLSVMFW
YSGWLTLIVVLSLPLYATISGLITPVLRQRLNDKFARGADNQSFLVETVSGIGTVKAMAV
DPRVTRTWDNQLAGYVSAGFNVTRIATLGQQGVQLVQKLTAVAVLFWGAKLVMEGKLSIG
QLIAFNMLSGQVTAPIIRLAQLWQDFQQVGISVERLGDILNTRTEVPGSRLALPPIRGQV
TFERVTFRYRPDAPEVLNGIELDIRPGEIIGIVGRSGSGKSTLTKLVQRLYTPERGRVLI
DGQDLALADPAWLRRQLGVVLQENFLFNRSVRENIALTDPGMPLERVIHAAKLAGAHEFI
LELPEGYDTKVGEHGTGLSGGQRQRIAIARALIGDPRILILDEATSALDYESEHAVMSNM
RAICKGRTVLIIAHRLSTVRQANRIVVVEKGRIIESGSHAELVDRPEGQYAHLYRLQQGT
P
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggggaagtgcgtcgctctcgttgctcgagggcggctcgtcggtgcaagaccga
ccggatctggggctgcaggggctggtcctgctggcgcaatttcatggcgttgccgcggat
gcggtgcagctggcgcatgggtttggccgaggcggtgagccgttcgacgaaaccacgttg
ctgctggccgccaagcagctggggctgaaagccaaagtcgtggcccagccggctgcgcgg
atcggcatggccgcgttaccggccttggccctggtgccggatggcgacgccttcatcgtt
gccaaggtcggcgcggaccagatcctgatccacgatctggtcgaaaagcggccgcgctcc
atctcgcctgccgagttcgaagcgcgttaccaggggcgattgttgcaggtggcctcgcgg
gcttcggtgctgggcgacctggccaagttcgactttagctggttcattcctgcggtggtg
aagtaccgcaagttgatgatcgaggtcttcgtcgtctcgttcttcatccagctgttcgcg
ctgatcacgccactgttctatcaagtggtgatggacaaggtgctggtgcacaacggcctg
accacgctggacgtgatcgcgatcgggctggtctcgatggcggtgttcgacgtgttgctg
tccggactgcgcacctacgtgttcgcccacaccaccagcaagatcgacgtggagctgggt
gcgcggctgttccggcatgtgttgtcgctgccgttggcgtattttgaatcgcggcgggtc
ggcgacaccatcgcgcgcgtccgcgagctggagaatatccgcaacttcctgaccggacag
gcgctgacgtcggtgctagacctgttctttacggtggtctttctgtcggtgatgttctgg
tacagcggttggctgaccttgatcgtggtgctgtcgctgccgttgtacgccacgatttca
ggtttgatcaccccggtgttgcgccagcgtttgaacgacaagttcgcacgcggtgccgac
aaccaatccttcctggtggagacggtcagcggcatcggcacggtcaaggcgatggcggtg
gatccgcgtgtgacccgcacctgggataaccagctggccggctatgtcagtgccggtttc
aacgtcacccgcatcgcaacgctgggccagcagggcgtgcagttggtgcagaagctcact
gccgtcgcagtgctgttctggggcgccaagttagtgatggaaggcaagctgtcgatcggt
cagttgattgccttcaacatgttgtccggccaggtcaccgcgccgattattcgcttggct
caattgtggcaggacttccaacaggtcggtatttcggtcgagcgcttgggcgacattctc
aatactcgcaccgaggtgccgggcagccgcctggcactgccgccgattcgcgggcaggtg
acgttcgagcgggtcacgttccgctatcggccggatgcccccgaggtgctcaacgggata
gagctggacattcgcccaggcgaaataatcggcatcgtcggccgttccggctccggcaag
agcacgctgaccaagctggtgcagcggctctacacgcccgagcgtgggcgggtgctgatc
gatggccaggatctagcgctggccgatcctgcctggttgcgtcgtcagctgggcgtggtg
ctgcaggagaacttcctgttcaaccgcagcgtgcgcgagaacatcgcgttgaccgatccc
ggcatgccgctggagcgggtgatccatgccgccaagctggcaggcgcccacgaattcatt
ctggaactgcccgaaggttacgacaccaaggttggcgagcatggcaccggtttgtctggc
gggcagcgccagcgcattgcgatcgcgcgcgcgctgatcggcgatccgcgcatcctgatt
ctcgacgaagccaccagtgcgctcgactacgagtcggagcatgcagtgatgagcaatatg
cgcgcgatctgcaaggggcgcaccgtcctgatcatcgcgcatcgcctttccaccgtgcgg
caggcaaatcgcatcgtcgtggtggagaagggacgcatcatcgagagcggctcgcatgcc
gagctggtcgaccggccggaaggccagtacgcgcatctatacagactgcaacaggggaca
ccatga
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integrated database retrieval system
