Xanthomonas hortorum pv. gardneri: BI317_21045
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Entry
BI317_21045 CDS
T04668
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
xga
Xanthomonas hortorum pv. gardneri
Pathway
xga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BI317_21045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xga03019
]
BI317_21045
03110 Chaperones and folding catalysts [BR:
xga03110
]
BI317_21045
03029 Mitochondrial biogenesis [BR:
xga03029
]
BI317_21045
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xga04147
]
BI317_21045
Enzymes [BR:
xga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BI317_21045
Messenger RNA biogenesis [BR:
xga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BI317_21045
Chaperones and folding catalysts [BR:
xga03110
]
Heat shock proteins
HSP60 / Chaperonin
BI317_21045
Mitochondrial biogenesis [BR:
xga03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BI317_21045
Exosome [BR:
xga04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BI317_21045
Exosomal proteins of other body fluids (saliva and urine)
BI317_21045
Exosomal proteins of breast cancer cells
BI317_21045
Exosomal proteins of colorectal cancer cells
BI317_21045
Exosomal proteins of bladder cancer cells
BI317_21045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
APP86254
LinkDB
All DBs
Position
complement(4633628..4635271)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDIRFGEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASRTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGI
DQAVKAAVIELKNISKPTTDDKAIAQVGTISANSDESIGNIIAEAMQKVGKEGVITVEEG
SGLENELDVVEGMQFDRGYLSPYFINNQQSQSADLDDPFILLHDKKISNVRDLLPVLEGV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVVAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLALEKATIKDLGRAKKVQVSKENTTIIDGAGDSATIEARVGQIKTQIEDTSSDY
DREKLQERVAKLAGGVAVIKVGASTEIEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALVAVGNLTGANEDQTHGIQIALRAMEAPLREIVANAGEEPSVILNKVKEGTGNYGYNA
ANGEFGDMVEFGILDPTKVTRSALQNAASIAGLMITTEAMVADAPKKDEPAMPGGGGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacattcgtttcggtgaagacgcacgtacccgtatggtccgtggcgtc
aacgtgcttgccaatgccgtcaaggcaaccctgggcccgaagggccgcaacgtcgtgctc
gagaagagcttcggcgcgccgaccatcaccaaggacggcgtctccgtcgccaaggaaatc
gaactggctgacaagttcgagaacatgggcgcgcagatggtgaaggaagtcgcgtcgcgc
accaacgacaacgccggcgacggcaccaccaccgccaccgtgctggcccaggccctgatc
cgcgaaggcgccaaggctgtggccgccggcatgaacccgatggacctcaagcgcggtatc
gaccaggccgtcaaggccgccgtcatcgagctgaagaacatctccaagcccaccaccgac
gacaaggcgattgcccaggtcggcaccatctcggccaactcggacgagtcgatcggcaac
atcattgccgaagcgatgcagaaggtcggcaaggaaggcgtgatcaccgttgaagaaggc
tcgggcctggaaaacgagctggacgtggtcgagggcatgcagttcgatcgcggctacctc
tccccgtacttcatcaacaaccagcagagccagtcggccgatctggacgacccgttcatc
ctgctgcacgacaagaagatctccaacgtgcgcgacctgctgcccgtgctggaaggcgtg
gccaaggccggcaagccgctgctgatcgtcgctgaagaagtcgaaggcgaagcgctggcg
accctggtggtcaacaccatccgtggcatcgtcaaggtcgtggccgtcaaggcaccgggc
ttcggcgaccgtcgcaaggcgatgctggaagacatggccgtgttgaccggcggcaccgtg
atctccgaggaagtgggtctggcgcttgagaaggccaccatcaaggacctgggccgtgcg
aagaaggtgcaggtctccaaggagaacaccaccatcatcgacggcgccggcgactcggcc
acgatcgaagcccgcgttggccagatcaagacccagatcgaagacacctcgtccgattac
gaccgcgagaagctgcaggaacgcgtggccaagctggccggtggcgttgcagtgatcaag
gtcggcgcttcgaccgaaatcgaaatgaaggaaaagaaggcccgcgtcgaagacgccctg
cacgccacccgtgcagccgtcgaagaaggcgtggtcccgggcggcggtgtggccctggtg
cgtgcgctggtggccgtcggtaacctgaccggtgccaacgaagaccagacccacggcatc
cagatcgccctgcgcgccatggaagccccgctgcgcgaaatcgtggccaatgccggcgaa
gagccgtccgtgatcctgaacaaggtcaaggaaggcaccggcaactacggttacaacgcg
gccaacggcgagttcggcgacatggtcgagttcggcatcctggacccgaccaaggtgacc
cgttctgccctgcagaacgccgcttcgatcgccggcctgatgatcaccaccgaagccatg
gtggccgatgccccgaagaaggacgagccggcaatgcccggcggcggtggcggcatgggc
ggcatgggcggtatggatttctga
DBGET
integrated database retrieval system
