Xanthomonas hortorum pv. gardneri: BI317_21125
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Entry
BI317_21125 CDS
T04668
Name
(GenBank) Fis family transcriptional regulator
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
xga
Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xga03000
]
BI317_21125
03036 Chromosome and associated proteins [BR:
xga03036
]
BI317_21125
03400 DNA repair and recombination proteins [BR:
xga03400
]
BI317_21125
Transcription factors [BR:
xga03000
]
Prokaryotic type
Helix-turn-helix
Other families
BI317_21125
Chromosome and associated proteins [BR:
xga03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BI317_21125
DNA repair and recombination proteins [BR:
xga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BI317_21125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Fis_N
HTH_30
Phage_NinH
HTH_29
BrkDBD
Xre-like-HTH
ZNHIT3_C
HTH_28
HTH_23
HTH_17
Motif
Other DBs
NCBI-ProteinID:
APP86269
LinkDB
All DBs
Position
4649934..4650206
Genome browser
AA seq
90 aa
AA seq
DB search
MNAAPARPDTSRGAPKSPLREHVAQSVRRYLRDLDGSDADDVYEIVLREMEIPLFVEVLN
HCEGNQSRAAAMLGIHRATLRKKLKEYGLT
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgcagcccccgctcgtcctgacaccagtcgtggcgccccgaagtcgccgctgcgc
gaacacgtggcccagtccgtccgccgttatctgcgcgacctggacggcagcgacgccgat
gatgtgtatgaaatcgtgctgcgcgagatggagatcccgttgttcgtggaagtgctcaac
cactgcgaaggcaaccagagccgcgccgcggcgatgctgggcatccatcgggcgacgttg
cgcaagaaactgaaagagtacgggctgacctaa
DBGET
integrated database retrieval system
