Xanthomonas hortorum pv. gardneri: BI317_21250
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Entry
BI317_21250 CDS
T04668
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
xga
Xanthomonas hortorum pv. gardneri
Pathway
xga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BI317_21250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xga03019
]
BI317_21250
Messenger RNA biogenesis [BR:
xga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BI317_21250
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
APP86290
LinkDB
All DBs
Position
complement(4681362..4681979)
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AA seq
205 aa
AA seq
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MIDPDGFRPNVGIVLMRQDGQVFWARRVRRDGWQFPQGGMNTDETPVEAMYRELREETGL
LPEHVSVLGATPGWLRYRLPSRAVRRNERQVCIGQKQVWFLLQFTGEESHLKLDHTDTPE
FDHWRWVDFWYPVEHVVMFKRGVYARALRHLAPLAQNLAGPAAVGVMPERALEAWLPGSS
AAGHDSPRKRPRKRSGARTVRINND
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatccggacggcttccggccaaacgttggcatcgtgctgatgcggcaagacggt
caggtgttctgggcacgacgtgtgcgcagggacggctggcagtttccgcaaggtggcatg
aataccgacgagacacccgtcgaagccatgtaccgcgagttgcgcgaagaaaccgggttg
ttgcccgagcatgtgtccgtgctcggcgccacccctggatggctacgctatcgcctgccc
agccgggcggtgcgccgcaacgaacgccaggtgtgtatcggccagaagcaggtctggttc
ctgctgcaattcactggcgaagaatcccatctcaagctcgaccataccgatactccggag
ttcgaccactggcgctgggtggatttctggtatccggtcgagcatgtggtgatgttcaaa
cgcggcgtctacgcgcgcgcgctgcgccatctggcgccactggcgcagaacctggcgggg
ccggccgctgtcggtgtgatgcccgagcgtgcgctggaggcgtggttgccgggcagcagc
gcagcggggcacgacagcccgcgcaagcgtccgcgtaagcgcagcggggctcgcacggtg
cggattaataatgattaa
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