Xanthomonas hortorum pv. gardneri: BI317_24470
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Entry
BI317_24470 CDS
T04668
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xga
Xanthomonas hortorum pv. gardneri
Pathway
xga03420
Nucleotide excision repair
xga03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BI317_24470
03430 Mismatch repair
BI317_24470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xga03400
]
BI317_24470
Enzymes [BR:
xga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BI317_24470
DNA repair and recombination proteins [BR:
xga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BI317_24470
MMR (mismatch excision repair)
Other MMR factors
BI317_24470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_30
cobW
MobB
Motif
Other DBs
NCBI-ProteinID:
APP87229
LinkDB
All DBs
Position
pICMP7383.1:complement(54826..55920)
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AA seq
364 aa
AA seq
DB search
MSSVPSPNRVLLSAAGSGKTTLLVRQALERHGRRIAIVTYTLENLEEIRRSFEVHAGAVP
AHVTLHSWYGFLLRQCIRPYQAALCPEPRIETILFVEGVTNNRAPRTQVARHYLAGNRMY
SDRAADFAVRCDELTQGQVVARLAAMYDELYIDEVQDLAGYDLDLVERLLKSDIAITLVG
DTRQATYATNYAQRHSQYRGPNLAALFQIWESDGLCQLDHRLISLRCIQALCDMADTLYP
QMPRTQSGNGEVTGHDGIYLVAPGDVAAYMQEFAPTVLRHDRRQACDGRPAVNFGQCKGR
TYSRVLIFPNGPLTQYLRTADAARITAPPKYYVAFTRARQSVAFVYAGVCTLPGHQLYVP
SAST
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgtgccatcgcctaaccgggtactgctctcagcggcaggctcgggcaagacc
acgctgctggtccggcaggccttggagcgacatggtcgccgcatcgcgattgtcacctac
acgctggaaaaccttgaagagatccggcgctcgtttgaggtccacgccggcgcggtgccc
gcgcatgtcaccttgcacagctggtatggctttctgctgcgccagtgcatccgcccgtac
caagctgcgctgtgccctgagcctcgcatcgagaccatcctgttcgtggaaggtgttacc
aacaaccgcgccccacgcacccaggtagcgcgccactacctggcaggcaaccggatgtat
tcggaccgggcggccgactttgctgtgcgctgcgatgagctgacccaaggtcaggtcgtg
gcacgcttggcggccatgtacgacgagctctacatcgacgaggtccaggacctggccggc
tacgatctggatcttgtcgagcggctgctgaagagtgatatcgccattacgttggtaggt
gatacgcgccaagcgacgtatgccaccaactatgcgcaaaggcacagccagtatcgtggc
cccaatctggcagcgctgtttcagatctgggagtcggatggcttatgccagctggatcac
cgcctcatcagcctgcgctgcatccaggccctgtgcgatatggctgacacgctctatccg
cagatgccccggactcaatcaggcaatggcgaggtcaccgggcacgatggcatctacctc
gtcgctccaggggatgttgcggcgtacatgcaggagtttgcccccaccgtgcttcggcat
gaccggcggcaagcctgcgacggacggcctgcggtgaacttcgggcagtgcaagggccgc
acctattcccgggtcctaatcttccccaacgggccgttgacgcagtacctgcgcacggca
gatgcggcgcgtatcactgcgccaccgaaatactacgtggcctttacccgggcgcggcaa
agcgtggcatttgtgtacgccggcgtgtgtacgctgccggggcatcagctctatgtcccc
agcgcaagcacatag
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