Xanthomonas hortorum pv. gardneri: BI317_25700
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Entry
BI317_25700 CDS
T04668
Name
(GenBank) avirulence protein
Organism
xga
Xanthomonas hortorum pv. gardneri
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Gene cluster
GFIT
Motif
Pfam:
TAL_effector
TrmE_N
HEAT_2
DUF3891
Motif
Other DBs
NCBI-ProteinID:
APP87441
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All DBs
Position
pICMP7383.3:3291..6392
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AA seq
1033 aa
AA seq
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MDPIRSRTPIPARELLPGPQPDRVQPTADRGVSPPAGGPLDGLPARRTMSQTRLPSPPAP
MPAFSAGSFSDLLRQFDPSLFDSVSAFGAPHTEAAPGELDEVQSVLRAADDPQPTVHVVV
TAARPPRAKPAPRRRAAQPSDASPAAQVDLRTLGYSQQQQEKIKSKARSTVAQHHKALVG
HGFTHAHIVELSKHPAALGTVAVKYQAMIAALPEATHEDVVGVGKQWSGARALEALLTVA
GELRSPPLQLDTGQLFKIAKRGGVTAVEAVHAWRNALTGAPLNLTPEQVVAIASNNGGKQ
ALETVQRLLPVLCQAPHDLTREQVVAIASIGGGKQALETVQRLLPVLCQAPHCLTREQVV
AIASNIGGKQALETVQALLPVLCQAPHCLTREQVVAIASNIGGKQALETVQRLLPVLCQA
PHCLTPEQVVAIASNIGGKQALETVQRLLPVLCQAPHCLTPEQVVAIASHDGGKQALETV
QRLLPVLCQAPHDLTPEQVVAIACHDGGKQALETVQRLLPVLRHAHGLTREQVVAIASNG
GGKQALETVQALLPVLRQAHGLTREQVVAIASNNGGKQALETVQRLLPVLRQAHGLTREQ
VVAIASNIGGKQALETVQRLLPVLCQAPHDLTREQVVAIASHDGGKQALETVQRLLPVLC
QAPHDLTREQVVAIASHDGGKQALETVQRLLPVLCQPPHDLTPEQVVAIACHDGGKQALE
TVQALLPVLRQAHGLTREQVVAIASNGGGKQALESIFAQLSRPDPALAALTNDRLVALAC
IGGRSALNAVKDGLPNALTLITRANSRIPERTSHLVADHTQVVRVLGFFQCHSHPAQAFD
EAMTQFGMSRHGLLQLFRRVGVTELEARSGTLPPASQRWHRMLQASGIKRAKPSSASAQT
PDQESLHAFADSLERELDAPSPMDQAGQVLASSRRKRSRSDRSVTGSSAQQAVEVLVPEQ
RDALHLPLLSWGVKRPRTRIGGLLDPGTPMDADLVASSTVVWEQDADPFAGTADDFPAFN
EEELALLMELLPH
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggatcccattcgttcgcgcacgccaattcctgcccgcgaacttctgcccggcccccaa
ccggatagggttcagccgactgcagatcggggggtgtctccgcctgctggcggccccctg
gatggcttgccggctcggcggacgatgtctcagacccggctgccgtccccccctgcaccc
atgcctgcattctcagcgggcagcttcagcgatctgctacgtcagttcgatccgtcgctt
tttgattcggtgtctgccttcggcgctcctcatacagaggctgccccaggagagttggat
gaggtgcaatcggttctgcgtgcagccgatgacccgcaacccaccgtgcacgtcgttgtc
actgccgcgcggccgccgcgcgccaagccggcgccgcgacggcgtgctgcgcaaccctcc
gacgcttcgccggccgcgcaggtggatctacgcacgctcggctacagtcagcagcagcaa
gaaaagatcaaatcgaaggctcgttcgacagtagcgcagcaccacaaggcactggtcggc
catgggtttacacacgcgcacatcgttgagctcagcaaacacccggcagcgttagggacc
gtcgctgtcaagtatcaggccatgatcgcggcgttgccagaggcgacacacgaagacgtc
gttggcgtcggcaaacagtggtccggcgcacgcgctctggaagcattgctcacggtggcg
ggagagttgagaagtccaccattacagttggacacaggccaacttttcaagattgcaaaa
cgtggcggcgtgaccgcggtggaggcagtgcatgcatggcgcaatgcactgactggtgcc
cccctgaacctgaccccggagcaggtggtggccatcgccagcaataacggcggcaagcag
gcgctggagacggtgcagcggctgttgccggtgctgtgccaggccccccatgacctgacc
cgggagcaggtggtggccatcgccagcattggcggcggcaagcaggcgctggagacggtg
cagcggctgttgccggtgctgtgccaggccccccattgcctgacccgggagcaggtggtg
gccatcgccagcaatattggcggcaagcaggcgctggagacggtgcaggcgctgttgccg
gtgctgtgccaggccccccattgcctgacccgggagcaggtggtggccatcgccagcaat
attggcggcaagcaggcgctggagacggtgcagcggctgttgccggtgctgtgccaggcc
ccccattgcctgaccccggagcaggtggtggccatcgccagcaatattggcggcaagcag
gcgctggagacggtgcagcggctgttgccggtgctgtgccaggccccccattgcctgacc
ccggagcaggtggtggccatcgccagccacgatggcggcaagcaggcgctggagacggtg
cagcggctgttgccggtgctgtgccaggccccccatgacctgaccccggagcaggtggtg
gccatcgcctgccacgatggcggcaagcaggcgctggagacggtgcagcggctgttgccg
gtgctgcgccatgcccatggcctgacccgggagcaggtggttgccatcgccagcaatggc
ggcggcaagcaggcgctggagacggtgcaggcgctgttgccggtgctgcgccaggcccat
ggcctgacccgggagcaggtggtggccatcgccagcaataacggcggcaagcaggcgctg
gagacggtgcagcggctgttgccggtgctgcgccaggcccatggcctgacccgggagcag
gtggtggccatcgccagcaatattggcggcaagcaggcgctggagacggtgcagcggctg
ttgccggtgctgtgccaggccccccatgacctgacccgggagcaggtggtggccatcgcc
agccacgatggcggcaagcaggcgctggagacggtgcagcggctgttgccggtgctgtgc
caggccccccatgacctgacccgggagcaggtggtggccatcgccagccacgatggcggc
aagcaggcgctggagacggtgcagcggctgttgccggtgctgtgccagcccccccatgac
ctgaccccggagcaggtggtggccatcgcctgccacgatggcggcaagcaggcgctggag
acggtgcaggcgctgttgccggtgctgcgccaggcccatggcctgacccgggagcaggtg
gtggccatcgccagcaatggcggcggcaagcaggcgctggagagcatttttgcacagtta
tctcgccctgatccggcgttggccgcgttgaccaacgaccgcctcgtcgccttggcctgc
atcggcggacgctctgcgctgaatgcagtgaaagacggattgccgaatgcgctgacattg
atcacaagagccaatagccgtattcccgaacgcacatcgcatctcgttgccgaccacacg
caagttgttcgcgtgctgggttttttccagtgccactcccatccagcgcaagcatttgat
gaagccatgacgcagttcgggatgagcaggcacgggttgttacagctatttcgcagggtg
ggcgtcaccgaactcgaagcccgcagtggaacgctccccccagcctcgcagcgttggcac
cgtatgctccaagcatcagggataaaaagggcgaaaccgtcctctgcttcggctcaaacg
ccggaccaggagtctttgcatgcattcgccgattcgctggagcgtgaactggatgcgccc
agcccaatggaccaggcaggccaggtgctggcaagcagccgccgcaaacggtcccgatcg
gatcgttctgtcaccggctcctccgcacagcaagctgtcgaggtgctcgttcccgaacag
cgcgatgcgttgcatttgcccctcctcagctggggtgtaaaacgcccgcgtaccaggatc
ggcggcctcctggatcctggtacgcccatggatgccgacctggtagcgtccagcaccgtg
gtttgggaacaagatgcggaccccttcgcagggacagcggatgatttcccggcattcaac
gaagaggagctcgcattgttgatggagctattgcctcattga
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