KEGG   Xiphias gladius (swordfish): 120782910
Entry
120782910         CDS       T07311                                 
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120782910 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xgl03019]
    120782910 (rae1)
   03036 Chromosome and associated proteins [BR:xgl03036]
    120782910 (rae1)
Messenger RNA biogenesis [BR:xgl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120782910 (rae1)
Chromosome and associated proteins [BR:xgl03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    120782910 (rae1)
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WDR55 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_RFWD3 Beta-prop_IFT140_1st eIF2A Beta-prop_EIPR1 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_Nup120_160 Exonuc_X-T_C
Other DBs
NCBI-GeneID: 120782910
NCBI-ProteinID: XP_039971400
LinkDB
Position
LG21:complement(24981127..24986584)
AA seq 369 aa
MSLFGTSSGFGTGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQT
MQIAQHDGPIKAIHWIKAPNYSCVMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttatttgggacgagctccgggtttggaacaggtgggactggtgtcttcgggagt
acaacaacagacagccacaatccaatgaaggatgttgaagtgacttcacctccagatgac
agcatcagctgtctggcttttagtccacccaccatgccagggaacttcctcattggggga
tcctgggccaacgatgtcaggtgctgggaggtgcaggacaatggacagactgtccccaaa
gcccagcagatgcacacaggtccagtgctggatgtatgctggagtgatgatgggagtaaa
gtgttcactgcttcctgtgacaagacagccaagatgtgggatcttaacagcaatcaaaca
atgcagattgcacagcatgatggtccgatcaaagcaatccactggataaaagcccctaac
tacagctgtgtcatgactggtagctgggacaaaacactgaagttttgggacacccgctct
cccaatcctatgatgtctctacagatgccagagagatgctactgtgctgatgttgtctac
cccatggcagtggttgccacagccgagagaggactgatagtgtaccagttggagaaccag
ccctctgaatttcgcagaatagactctcctctcaaacatcagcatcgctgtgttgccata
ttcaaggacaagcagaacaagcccacaggctttgcactgggaagcattgagggccgagtg
gccatccactacatcaaccctccaaacccagccaaagacaacttcaccttcaagtgccac
aggtccaatggaaccaacacaaccactccacaggacatatacgctgtgaatgctatctcc
ttccatcctgtccatggcacactggctactgtgggctcagacgggcgcttcagcttctgg
gacaaagacgcccgcaccaagttgaagacatcagagcagctcgatcagcccataacggct
tgctgcttcaatcacaatggcaatatctttgcatatgcttccagttacgactggtcgaag
ggccatgagtactacaacccccagaaaaagaactacatcttcctgaggaacgctgccgag
gagctcaagcctcggaacaagaaatggtga

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