Xiphias gladius (swordfish): 120782916
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Entry
120782916 CDS
T07311
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120782916
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120782916
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120782916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-RING_11
zf-RING_5
Crescentin
WEMBL
zf-C3HC4_4
HIP1_clath_bdg
zf-RING_Vps41
Zn_ribbon_8
Aminoglyc_resit
zf-RING-like
Gp58
zf-RING_16
zf_RING_Vps8
GAS
KASH_CCD
RINGv
MerR-DNA-bind
FANCL_C
zf-Nse
FapA
RING_XB3-XBAT31
SLX1_C
Filament
DUF4200
Fez1
Fib_alpha
MAD
Motif
Other DBs
NCBI-GeneID:
120782916
NCBI-ProteinID:
XP_039971409
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All DBs
Position
LG21:complement(25897633..25902585)
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AA seq
449 aa
AA seq
DB search
MPIRAYCTICSDFFDHSKDVAAIHCGHTFHYECLLQWFQTAPTKTCPQCRKQVSTRHIIN
RLYFDIAGEGEATADPESLQNELDKMKALLSSKERDWRDKQKVVDNLKETVDKQRRDLDS
VRKEIVEKEMLCSALRKQMTYLETQQNEVQAAKEEVRRLRIKMKTFESLDVLLQGQRAEV
DSMITDMGVSQAAVEQLSIYCISLKKEYDNLKGNLKSSNELCEKLKRELLSSNNKSQKAS
MEANKTKEDMKSLQNDLANADKEISSLKKRVQFLQKTLSTPTRTNETLSRLVFESPAPVE
LKHPRLHQPADSEDVDLNMTYDITTPEDVAKKPTQVPSKKMRLDPPLTSMSKHNEKSSSL
TKARDEDRSMDLFLRNSLLFRKKTFGSMLDPQRKPGAVRTGYDGLGGRTKFIQPSPLSEI
RPMMKVRRKKVTRPPPKIATCLTLDSYLE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgagcatattgtacaatttgctccgatttcttcgatcactccaaggatgtc
gctgccatccactgcggacacactttccactacgaatgtcttctccagtggttccagaca
gcccccacgaaaacctgcccacagtgtaggaaacaggtcagcacccgacacattatcaac
aggctctactttgacattgccggagagggagaggccacagcggacccagagagcttgcag
aatgagctcgataaaatgaaggcacttttaagctctaaagagcgggactggcgggacaaa
cagaaggtggtggacaatttgaaggagactgtggacaagcagaggagagacttggacagt
gtgcgcaaggagattgtggaaaaggagatgctctgctctgctctcagaaaacagatgaca
tacttggagacccaacagaatgaagttcaggctgccaaggaggaggtccggagactcagg
attaaaatgaaaacttttgaaagcctggatgtgttgttacagggtcagagagcagaggtg
gactccatgatcacagatatgggtgtcagtcaggcagcagtggagcagctctccatctac
tgcatctctctcaaaaaagagtatgataatctaaaaggaaacctgaagtcttcaaatgag
ctgtgcgagaagctgaagagagaattgctctcctcaaacaacaagtcacaaaaagcctca
atggaggcgaataagaccaaagaggacatgaagtctctgcagaatgatctggccaacgct
gacaaagagatctctagtcttaagaagagagtgcaatttcttcagaagacactgagcacg
ccgacacggacaaacgaaaccctcagccggctcgtctttgaaagcccggcccctgtggag
ttgaagcatcctcgcctccaccaacctgcagatagcgaggacgttgacctcaatatgacc
tatgacatcaccacaccagaagatgtggccaagaaaccaacacaggtcccatccaagaag
atgcgtcttgaccctccattaacatccatgtccaaacacaatgagaaaagttcatcttta
accaaggcacgagatgaggacagatccatggatctgtttttgaggaactccctcctcttc
agaaagaagacttttggtagcatgttggaccctcagaggaagccgggagctgtgagaact
ggttatgacggattgggaggacgaaccaaattcatccaaccttctcctttatcagagatt
cgcccaatgatgaaggttagaaggaagaaggtgacccggcctccgcccaagattgcaact
tgcctgactctggacagctacctggagtaa
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