Xiphias gladius (swordfish): 120782978
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Entry
120782978 CDS
T07311
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120782978
Spliceosome [BR:
xgl03041
]
Common components
Common spliceosomal components
General mRNP proteins
120782978
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
RRM_5
DUF8400
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
120782978
NCBI-ProteinID:
XP_039971524
LinkDB
All DBs
Position
LG21
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AA seq
507 aa
AA seq
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MADDLDIEAMLEAPYRKEDTKAPSPNGQEERTKRKKRSRSHSRDRKRSRSRDRKRSRSRE
RKRSRSRDRRRSHSRSRERRRSRSRERGGRYRDHQKHRRRSRSKSPFRKEKSPIRQPIDN
LTPEERDARTVFCMQLAARIRPRDLEEFFSAVGNVRDVRMISDRNSRRSKGIAYIEFVEA
NSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGTSGPMRLYVGSLHFNITEE
MLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFADAECAKKALEQLNGFELAGRPMKVG
HVTERTDASTASSFLDSDELERTGVDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGA
IAIGAMAAVSAAMNPAMNPALNMNMNSAALNLPSQPLATHCFQLSNMFNPNSEEAPGWEM
DIQHDVIEECNKHGGVVHIYVDKNSTEGNVYVKCPTIPAAMAAVNALHGRYFAGKMITAA
YIPLPTYHNLFPESVTVTQLLAPPPRR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacctggacatcgaggcgatgctggaggctccatacaggaaggaggacacc
aaggccccgagccccaatggacaggaggagcgcaccaagaggaagaagcgaagccgcagc
cacagccgcgacaggaagcgcagcaggagtcgagacaggaagaggagccgcagtcgagag
cgtaaacgcagccgcagcagagacagacgaagaagtcacagccgcagccgagaacgacgc
cgcagccgcagccgggagagaggggggcgctacagagaccaccagaagcaccgccggcga
tcgaggagtaagagtcccttcaggaaggagaagagtccgatcaggcagccaatagataac
ctgactccagaggaacgagatgcccggacggtcttctgtatgcagctggcagccaggata
cgacctcgagacctggaggagttcttctctgctgtggggaatgtccgagacgttaggatg
atctctgacagaaattcccgaaggtcgaagggcattgcctacatcgagtttgtggaggca
aactcagttcctctggccatcggactgacggggcaaaggctgctgggggttcccatcatc
gtacaggcctcacaggcagagaagaaccgggcagcagctgcagccaacaacctgcagaag
ggaacatcgggaccgatgaggctgtatgtcggctctctgcacttcaacatcaccgaggag
atgctgagaggaatctttgaaccgtttggacggattgagagcatccagctgatgatggac
agtgagactggacgatctaaaggctacggcttcatcacttttgcagatgcagagtgcgct
aagaaagctctggagcagctgaacggcttcgagctggcaggtcgacccatgaaggtgggt
catgtgacagagcggaccgacgcctccacagcgtcgtctttcctcgacagtgacgaactc
gaacgcaccggcgtcgacctgggaaccaccgggcgactgcagctcatggcccgactcgct
gagggtacaggtctgcagatccctcctgctgctcagcaggctctacagatgagtggagct
atcgctataggagccatggctgctgtgtcagccgcaatgaacccggccatgaatccagct
ctcaacatgaacatgaactctgctgctctgaatcttccctctcagccgctcgccacacac
tgctttcagctgtctaacatgttcaaccccaacagtgaggaggctcctggttgggagatg
gatatccagcatgatgtcatagaggagtgtaacaaacatggaggagtcgttcacatctac
gtcgacaaaaactccactgagggaaacgtctacgtcaaatgtccgacgatcccagctgcc
atggctgctgtcaacgccctccacgggagatactttgctggtaagatgatcacggcggct
tacatccccctgcccacctatcacaacctgttcccagagtctgttaccgtcacacagctt
ctggccccgcccccacgacggtga
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integrated database retrieval system
