Xiphias gladius (swordfish): 120783008
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Entry
120783008 CDS
T07311
Symbol
cpne1
Name
(RefSeq) copine-1 isoform X1
KO
K24526
RNA-binding protein 12
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120783008 (cpne1)
Spliceosome [BR:
xgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120783008 (cpne1)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
120783008
NCBI-ProteinID:
XP_039971597
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Position
LG21:6700219..6734183
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AA seq
902 aa
AA seq
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MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGSIKGSKVSLLLSSKTEMQNMIELSRRRFEAGAGAVETAAPTAGNANRQAGAAPIPTVQ
PGAGGRSGSHGNQGFSNTSASVTAASSTQEPPSNKAAASLASVVPCFPNSYSSAPTITTA
LASLNAGPPPIPPLPSMPSMPPMPTLPTIPVPPPVSSLPPVPTVSPLSQGPPVPPMSHLP
HMSSLPPFNPSLPPPGGLGSGLPLGTPNPMLFNPLSPLASLGLQAHMKAAAAAASGAGAA
NHDELFVLLQNLPFSCTEVEVREFFRGLGVDGVRLLRDGQGRPSGRAMVKFFSPQDSFEA
VKRGGGMMGQRFIEITPASERQWASLSDSTTGHGPHNSSKSNNSNESQDQQHRRSNAGSG
GRDQRGRSRSPHRQEFCVYLKGLPYEADKKQIKEFFKNLAIVEDSIYIAYGPSGRATGEG
FLEFKTEQDYKTALGAHMQYMGTRFIQVHPISRKGMLEKIDIIRKREAAQGDGKNQDGLK
TPRNCAHITNIPYNVSKKDVRAFLEGVGLYEDTLKVLTDSHGNGLGQAIFQLRTEEDARK
AERLHRQKLNGRDAFVHLVTFEQMKEIERNPPPQNKRGQRNQNQQNQNQNQHQQAQPNPQ
QHQINPFAGISGEEFNFLRNTMGNLNSAPFVTPFSAPGNGLAGPPPLPPLAAGLGDVNLG
VAPPLVAGLPGAPILEPPGFRPGAGAGAPFSQDGLRGLVPFDNANRKGGGGGQNRGGGAN
NNQGRPGGGAAGGQQGFTPGADGLRNQPVPGASNNPNSQRGAAGPTIVKLQNMPFTVTVD
EIMDFFYGYQVLPGSVCLQFSEKGLPTGEAMVAFQNHEEAAAAVMDLNDRPIGARKVKIS
LG
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagtcatcaggctgcagggtctgcccatagtggccggcaccatggacatcaga
cacttcttctctggcctcaccatccctgacgggggagtgcacatcgttgggggtgagcat
ggtgaggccttcatcgtcttcgccactgatgaggacgctcggctgggcatgatgcgtaca
ggcgggtccattaagggctccaaagtgtcgctgttgctcagcagtaaaacagaaatgcag
aacatgattgaactcagccgccgcaggtttgaggctggtgcaggtgctgttgagacagca
gcacctacagcaggaaatgctaaccgacaagcgggtgctgccccaatacccacagtgcag
ccaggggcaggggggagaagtggtagccatggaaaccagggtttcagtaacacctcagcc
tcagtgacagcagcaagctcaactcaggagccaccaagcaacaaggcagcagccagcttg
gccagcgttgtgccctgcttccccaacagctacagctccgcacccacaatcaccacagct
ctggcatcgctcaatgcaggccccccacccatacctccacttcccagcatgccttccatg
ccccccatgcccacactccccaccattccagttccccctcctgtgtcctctctcccccct
gtccctactgtttcccccctttcccaaggacctccagtgcctcctatgtcccacctaccc
cacatgtcctccctgcctcccttcaacccctccctaccacccccagggggactgggttct
ggcctccctcttggaacccccaaccccatgctgtttaatcctctctcccctctggcctct
cttggcctgcaagcccatatgaaggctgctgctgctgcagccagcggagcgggagcagcc
aatcacgatgagttgtttgtcctcctgcagaacctcccattctcctgcacagaggtggag
gtcagggaattttttcggggtctgggggtggacggggtgcgtctgctgagggatgggcag
ggtcggccatctggcagggctatggtcaagttcttctcgcctcaggacagctttgaagct
gtgaagcggggaggtggtatgatgggtcaaaggttcattgagatcaccccagcctctgag
cggcaatgggccagcctcagtgacagcacgacgggccatggtcctcacaatagcagcaaa
tcaaataacagcaatgaatcacaggaccagcagcaccgccgtagtaatgctgggtcagga
ggcagggatcagcgaggaaggtcacggtctccccacaggcaggagttctgtgtttacctg
aaggggcttccctacgaagccgacaagaaacaaattaaggagttctttaagaatttagcc
attgtggaggacagcatctacatcgcgtatgggcctagcgggcgagccacaggagagggc
ttccttgagttcaaaacagagcaagattacaaaactgctctgggtgctcacatgcagtac
atgggcactcgcttcattcaggtccacccaatcagccggaagggaatgcttgaaaagatt
gacatcattcgcaaacgtgaagcagcacagggtgatggcaagaaccaggatggcttgaaa
actcccaggaactgcgcccacatcaccaacatcccttacaacgtctccaagaaggatgtc
cgtgccttcctggagggcgtggggctttacgaggacaccctgaaggtcctgacagacagc
cacggcaacggtttagggcaagctatcttccagctgcggactgaggaagatgcccgcaaa
gctgaaagactgcatcgtcaaaaattaaatggtcgtgatgcttttgtccacctggtgacc
tttgagcagatgaaggaaattgaaaggaatcctcctccccagaacaagaggggccaacgc
aaccagaaccagcaaaaccaaaatcagaatcagcaccagcaagcccagcccaatccccag
cagcaccagatcaacccatttgccgggattagtggagaggagtttaactttctcagaaac
actatggggaacctcaacagtgccccctttgtgactccattctcagccccagggaatggg
ctggcaggccctcctcctctgcctcctctggcagcagggttgggggatgtgaatttgggt
gtggctcctcctctagtagccggtcttcctggagctccaatcctagaaccaccaggcttt
cgacctggagcgggggcaggagctccattcagtcaggatgggctgagaggcttggtgccc
tttgacaatgccaacagaaaaggagggggaggaggacaaaaccgagggggaggggctaat
aacaaccaaggacgtccagggggcggggctgctggtggacaacaggggttcactccagga
gctgatggcctccgtaaccagccagtccctggagcttccaataatccaaatagtcaacgt
ggtgccgctggcccgacaattgtaaaacttcagaacatgccattcactgtaactgtggat
gagatcatggacttcttctatggctaccaggtgctgccaggctccgtctgcctgcagttc
agtgagaaaggactgccaactggcgaggcgatggtggccttccagaaccacgaggaggct
gctgccgccgtcatggacctcaatgaccgacctattggagcccgcaaggtcaagataagc
ctgggttaa
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