KEGG   Xiphias gladius (swordfish): 120783008
Entry
120783008         CDS       T07311                                 
Symbol
cpne1
Name
(RefSeq) copine-1 isoform X1
  KO
K24526  RNA-binding protein 12
Organism
xgl  Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xgl03041]
    120783008 (cpne1)
Spliceosome [BR:xgl03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    120783008 (cpne1)
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 120783008
NCBI-ProteinID: XP_039971597
LinkDB
Position
LG21:6700219..6734183
AA seq 902 aa
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGSIKGSKVSLLLSSKTEMQNMIELSRRRFEAGAGAVETAAPTAGNANRQAGAAPIPTVQ
PGAGGRSGSHGNQGFSNTSASVTAASSTQEPPSNKAAASLASVVPCFPNSYSSAPTITTA
LASLNAGPPPIPPLPSMPSMPPMPTLPTIPVPPPVSSLPPVPTVSPLSQGPPVPPMSHLP
HMSSLPPFNPSLPPPGGLGSGLPLGTPNPMLFNPLSPLASLGLQAHMKAAAAAASGAGAA
NHDELFVLLQNLPFSCTEVEVREFFRGLGVDGVRLLRDGQGRPSGRAMVKFFSPQDSFEA
VKRGGGMMGQRFIEITPASERQWASLSDSTTGHGPHNSSKSNNSNESQDQQHRRSNAGSG
GRDQRGRSRSPHRQEFCVYLKGLPYEADKKQIKEFFKNLAIVEDSIYIAYGPSGRATGEG
FLEFKTEQDYKTALGAHMQYMGTRFIQVHPISRKGMLEKIDIIRKREAAQGDGKNQDGLK
TPRNCAHITNIPYNVSKKDVRAFLEGVGLYEDTLKVLTDSHGNGLGQAIFQLRTEEDARK
AERLHRQKLNGRDAFVHLVTFEQMKEIERNPPPQNKRGQRNQNQQNQNQNQHQQAQPNPQ
QHQINPFAGISGEEFNFLRNTMGNLNSAPFVTPFSAPGNGLAGPPPLPPLAAGLGDVNLG
VAPPLVAGLPGAPILEPPGFRPGAGAGAPFSQDGLRGLVPFDNANRKGGGGGQNRGGGAN
NNQGRPGGGAAGGQQGFTPGADGLRNQPVPGASNNPNSQRGAAGPTIVKLQNMPFTVTVD
EIMDFFYGYQVLPGSVCLQFSEKGLPTGEAMVAFQNHEEAAAAVMDLNDRPIGARKVKIS
LG
NT seq 2709 nt   +upstreamnt  +downstreamnt
atggcggtagtcatcaggctgcagggtctgcccatagtggccggcaccatggacatcaga
cacttcttctctggcctcaccatccctgacgggggagtgcacatcgttgggggtgagcat
ggtgaggccttcatcgtcttcgccactgatgaggacgctcggctgggcatgatgcgtaca
ggcgggtccattaagggctccaaagtgtcgctgttgctcagcagtaaaacagaaatgcag
aacatgattgaactcagccgccgcaggtttgaggctggtgcaggtgctgttgagacagca
gcacctacagcaggaaatgctaaccgacaagcgggtgctgccccaatacccacagtgcag
ccaggggcaggggggagaagtggtagccatggaaaccagggtttcagtaacacctcagcc
tcagtgacagcagcaagctcaactcaggagccaccaagcaacaaggcagcagccagcttg
gccagcgttgtgccctgcttccccaacagctacagctccgcacccacaatcaccacagct
ctggcatcgctcaatgcaggccccccacccatacctccacttcccagcatgccttccatg
ccccccatgcccacactccccaccattccagttccccctcctgtgtcctctctcccccct
gtccctactgtttcccccctttcccaaggacctccagtgcctcctatgtcccacctaccc
cacatgtcctccctgcctcccttcaacccctccctaccacccccagggggactgggttct
ggcctccctcttggaacccccaaccccatgctgtttaatcctctctcccctctggcctct
cttggcctgcaagcccatatgaaggctgctgctgctgcagccagcggagcgggagcagcc
aatcacgatgagttgtttgtcctcctgcagaacctcccattctcctgcacagaggtggag
gtcagggaattttttcggggtctgggggtggacggggtgcgtctgctgagggatgggcag
ggtcggccatctggcagggctatggtcaagttcttctcgcctcaggacagctttgaagct
gtgaagcggggaggtggtatgatgggtcaaaggttcattgagatcaccccagcctctgag
cggcaatgggccagcctcagtgacagcacgacgggccatggtcctcacaatagcagcaaa
tcaaataacagcaatgaatcacaggaccagcagcaccgccgtagtaatgctgggtcagga
ggcagggatcagcgaggaaggtcacggtctccccacaggcaggagttctgtgtttacctg
aaggggcttccctacgaagccgacaagaaacaaattaaggagttctttaagaatttagcc
attgtggaggacagcatctacatcgcgtatgggcctagcgggcgagccacaggagagggc
ttccttgagttcaaaacagagcaagattacaaaactgctctgggtgctcacatgcagtac
atgggcactcgcttcattcaggtccacccaatcagccggaagggaatgcttgaaaagatt
gacatcattcgcaaacgtgaagcagcacagggtgatggcaagaaccaggatggcttgaaa
actcccaggaactgcgcccacatcaccaacatcccttacaacgtctccaagaaggatgtc
cgtgccttcctggagggcgtggggctttacgaggacaccctgaaggtcctgacagacagc
cacggcaacggtttagggcaagctatcttccagctgcggactgaggaagatgcccgcaaa
gctgaaagactgcatcgtcaaaaattaaatggtcgtgatgcttttgtccacctggtgacc
tttgagcagatgaaggaaattgaaaggaatcctcctccccagaacaagaggggccaacgc
aaccagaaccagcaaaaccaaaatcagaatcagcaccagcaagcccagcccaatccccag
cagcaccagatcaacccatttgccgggattagtggagaggagtttaactttctcagaaac
actatggggaacctcaacagtgccccctttgtgactccattctcagccccagggaatggg
ctggcaggccctcctcctctgcctcctctggcagcagggttgggggatgtgaatttgggt
gtggctcctcctctagtagccggtcttcctggagctccaatcctagaaccaccaggcttt
cgacctggagcgggggcaggagctccattcagtcaggatgggctgagaggcttggtgccc
tttgacaatgccaacagaaaaggagggggaggaggacaaaaccgagggggaggggctaat
aacaaccaaggacgtccagggggcggggctgctggtggacaacaggggttcactccagga
gctgatggcctccgtaaccagccagtccctggagcttccaataatccaaatagtcaacgt
ggtgccgctggcccgacaattgtaaaacttcagaacatgccattcactgtaactgtggat
gagatcatggacttcttctatggctaccaggtgctgccaggctccgtctgcctgcagttc
agtgagaaaggactgccaactggcgaggcgatggtggccttccagaaccacgaggaggct
gctgccgccgtcatggacctcaatgaccgacctattggagcccgcaaggtcaagataagc
ctgggttaa

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