Xiphias gladius (swordfish): 120783105
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Entry
120783105 CDS
T07311
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120783105 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xgl04515
]
120783105 (nfasca)
Cell adhesion molecules [BR:
xgl04515
]
Immunoglobulin superfamily
L1 family
120783105 (nfasca)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Bravo_FIGEY
BiPBP_C
DUF3792
Motif
Other DBs
NCBI-GeneID:
120783105
NCBI-ProteinID:
XP_039971770
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All DBs
Position
LG21:complement(31130474..31234331)
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AA seq
1216 aa
AA seq
DB search
MLGQGGHAALALMSLLLLWREATPIEVPQDPKIQQDLKQPPTIVKQSVKDYIVDPRDNII
IECEAKGNPVPTFSWRRNGKFFNIGKDPRVTMRKRSGTLEIGFRSGGRPEDYEGEYQCFA
SNDFGVALSNRILLRVSKAPLWPKEVLEPMVVTEGSPLVLPCNPPPGLPPPLTFWMNSAM
NSIPQDKRVSMGLNGNLFFSNVIAQDANTDYSCNARFFFTHTIQQKNPFTLKVQTKEPYN
DTSYNATDPYGGRRVAESTPTFLSPAGSESSKMVLRDEQLLLECIAAGLPTPTIKWFKKG
GDLPGQKVKFENFNKTLKIISVSEEDAGEYVCMANNQLGSIRHSIFVQVKAAPYWLDKPT
DLVLAPDENGRLVCRANGNPKPNIQWLINGQPIDSSPPNPSRQVLVDTIIFRSVQMGSSA
VYQCNASNQHGYLLANAFVSVLDMPPRMLGPKNQLIKVIENNRTFLDCPFFGSPLPELRW
FKNGQGSGLDGGQYRVYINGTLEIKKARAEDEGTYTCVANSILGTTENQVRLEVKEPTRI
VRAPEHQSAIRGSMARFDCKVTSDPSLPTTVAWAKDDKPLYLGWRLRKDEESLTIPNVNE
GDEGTYTCTVKSEIDQDSASARLTVLEEASLNPSVSSALPPDRPDPPTDLDMSDAAARSV
RLTWIPGNDHRSPITEFLVQFEEDRWEPGRWQDLSTYPGDLNSVILQLAPYVNYQFRVIA
INSVGQSKPSSPSQRYRTNGAAPDAIPKGLRGWGSKKDNMEITWEPLLDLERNGPNLHYN
VWWRRKDLGEEWSNVTTVGSKHIVHNTETYVPYEIRIQARNEYGLGPESNVVIGYSGEDK
PTDAPTDLRVSRVNSTKANIHWKPVDPNTIQGEFKEYRLYYWRESSLVPSLVVSKEKKTK
GFYSTMAQPSGILSDLVPYSKYKMFMVVANSRFEGPPSNTVEFTTMEGVPDAPRFFRINR
RSFDTIYLEWDRPLEPNGILIGYQLKYQTVNGSRVGQPQLETFLPNATDFSLRLPDRSTR
YKFYLSALTQVGAGEVYAEESPHFANEENFTNTTGLVALGRKIWNLTVEPNSNYANVSWR
HNFPAGSSEFVLEFTLDSDKTVKVVPVKQQPPITVADLIAGAKYHLRVYSHELNSVSSIS
IPFKTKAAYIDQVDIATQGWFIGLMCAIALIILILLIVCFIKRSRGGKYPVRDKKDLPLD
PVDQKDQDGSFDYQSN
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgttggggcagggcgggcatgcagccctggctctcatgtcattactgctgctgtggcgt
gaagcaacacccatcgaagtcccacaagacccaaagatccagcaagacctgaagcagccc
cccactatagtcaaacagtcagtgaaggactacattgtcgaccccagagataacatcatc
attgaatgtgaggccaagggcaacccggtgccaacgttctcatggcgaaggaacgggaag
tttttcaacattgggaaagatcccagggtgacgatgcgaaaacgctcaggaaccctggag
atcggtttccgtagtggaggacgaccagaggactacgaaggagagtaccagtgttttgcc
agcaatgactttggagtagctctgtccaacagaatcctgctccgagtctcaaaggctcct
ctgtggcctaaggaggtgctggagccaatggtggtgactgaaggctccccgctggttcta
ccatgcaaccccccaccaggtcttcctcctcccttgaccttctggatgaacagtgctatg
aattcgatccctcaggataagagagtgtccatgggtttgaatggaaacctgttcttctcc
aacgttattgcccaagatgctaacacagactacagctgcaatgcccgcttcttcttcaca
cacaccatccagcagaagaaccccttcacactcaaagttcagaccaaggagccgtataat
gacacatcttacaatgccactgatccctatggtggccgtagagtagctgagtccacgccg
accttcctctcaccggcaggcagtgagagctcaaaaatggtgctacgagatgagcaacta
ctgctggagtgtattgctgctggactaccgacgcctaccatcaagtggttcaagaagggc
ggggacctgccaggacagaaagtgaagtttgagaacttcaacaagaccctgaagattatc
agtgtgtcagaggaagatgctggagagtatgtatgcatggccaacaatcaattaggcagc
atacgccactccatctttgtccaggtgaaagcggctccatactggctggacaaacctaca
gacctggtgctagccccagatgagaacgggcgcctggtgtgtcgggccaacggcaaccct
aaacctaatattcagtggctgatcaatggacagcctatagacagctccccccccaacccg
agcagacaagtgttggttgacaccatcatcttccgctcggtgcagatgggaagcagcgct
gtctatcagtgcaacgcatccaaccagcacggctatctgttggccaatgccttcgtcagt
gttctcgacatgcctccaaggatgctgggccctaaaaatcagctgattaaagtcattgag
aacaaccgcaccttcctggattgtccattctttggttcccctctgccggagctacgctgg
tttaagaacggacagggcagtgggctggatggcggtcagtaccgtgtttacatcaacggt
accctggagatcaaaaaggcccgagcagaggatgagggcacctacacttgtgtggccaat
agcattcttggcacaaccgagaaccaggtccgcctggaggtcaaagagccaactcgtata
gttcgagcccccgagcaccagtcagccatcaggggctccatggctcgtttcgactgtaag
gtgacgtctgatcccagcctgcctaccactgtggcctgggcgaaggatgacaagcctctg
tatctgggatggaggctgaggaaggacgaggagtcgctgaccatccccaatgtgaacgag
ggtgatgaaggaacatacacctgcactgttaaatctgagatagaccaggactcagcctca
gcccgcctgactgtgttagaggaagcctccctcaacccctcagtctctagtgccttgcct
ccagaccgtccagaccctcccacggatctggacatgtcggacgcagcagcccgcagtgtt
cgcctcacttggatccccggaaatgaccacaggagccccatcacagagttcttggtccag
tttgaggaggaccgctgggagccaggcaggtggcaggacctgtccacttaccccggggac
ctcaactctgtcatcttgcagctcgccccctatgtcaactaccagttcagggtcatcgcc
atcaactcagtgggccagagtaagcccagcagcccctcacaacgatacaggaccaacgga
gctgccccagatgccattcccaaaggtctacggggatggggctccaagaaggataatatg
gagatcacttgggagcccctgcttgatctggagagaaatggcccaaacttgcactacaac
gtgtggtggagacggaaggatttgggggaagagtggagtaatgtgacaacagtggggtct
aaacatatcgtccacaacacagaaacctatgtgccttatgagatcagaatccaggccaga
aatgagtatggactaggacccgagtctaatgtggtcattggatactccggagaggacaag
cccactgatgctcccactgacctgcgggtgtccagggtcaacagcaccaaagcaaacatc
cactggaagcctgtggacccaaacactatccagggagaattcaaagagtacagattgtat
tactggcgtgaatccagtctggtcccaagtctggtggtcagtaaggagaagaagaccaaa
ggtttctacagcaccatggcccagccttctggcatcctcagtgacctggtgccctattct
aaatataagatgtttatggttgtggccaacagccgctttgagggtccacccagcaacacg
gtggaattcaccacaatggagggagttcctgatgctccaaggttcttccggatcaaccgg
aggagttttgacaccatctacttggaatgggacagaccactggagccaaacggcattctg
attggataccagctcaagtatcagacagttaatggctccagggtgggtcaaccacagctg
gagacttttctgcctaatgcaacagacttcagcctccgcctgccggaccgatctacccgc
tacaagttctacttgtcagcactcacacaggtgggagcaggggaggtctatgctgaggag
tctccacacttcgccaatgaggaaaactttactaatacaacaggtctagtggcccttggg
cggaagatctggaatctgacggtggagcctaacagtaactacgctaacgtcagctggaga
cacaacttcccggccggcagcagcgagtttgtgctagagttcacactggacagcgacaag
acggtgaaagttgtaccagtgaaacaacagccccccattacagtggcggatctgatcgca
ggcgccaagtaccatctgagggtttactcccatgagctcaacagcgtcagcagcatatct
atcccctttaagaccaaagcagcctacatagaccaggtagacatagccactcagggctgg
ttcattggcttgatgtgtgccattgccctcatcatactgatcctcctcatcgtctgcttc
atcaagaggagtcgcgggggcaaatacccagtgcgtgacaaaaaagatctccccttagac
ccagtggatcagaaagaccaagatggatcctttgattaccagtccaactga
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