Xiphias gladius (swordfish): 120783193
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Entry
120783193 CDS
T07311
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xgl01002
]
120783193 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120783193 (usp48)
Enzymes [BR:
xgl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120783193 (usp48)
Peptidases and inhibitors [BR:
xgl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120783193 (usp48)
Ubiquitin system [BR:
xgl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120783193 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
DUF4679
Motif
Other DBs
NCBI-GeneID:
120783193
NCBI-ProteinID:
XP_039971921
LinkDB
All DBs
Position
LG21:complement(31410793..31433196)
Genome browser
AA seq
1078 aa
AA seq
DB search
MAPRIQLEKAAWRWVETVKPEEIRQEHIELAYRVNLLACKRGACRRNCKGNPNCLVGIGE
QAWLGEIDENAFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRRSLYQC
LNSRAQEHNIESDYEPQSICEHLQYLFALLQNSNRKYIDPSGLVKALGLDTGQQQDAQEF
SKLFLSLLEDTLSKQKNPNLQNVIQRQFCGQFSYVTVCNECGRSSALPSRFYELELNIQG
HKNLTECVTEFLKEEKLDGENRYFCESCQSKQSATRRIKLHSLPPTLNLQLMRFVFDRQT
GHKKKLNTFISFPEQLDMGPFLEGKPDQRCVYELNAVLIHRGISAYSGHYIAHVKDARTG
DWYKFNDEEIEKMEGKKLQLGIEEDIAETVKSQTRKPKCSKGYHCSRNAYMLVYKVQEEE
SSDPSRTNVEVPAFLQRLVDQDNHKFEEWCSEMADMRKQSVDKGKAKHEEVKELYKLLPT
KDGEPYEFIPLDWLKKWLDDSTATKEIDNSLFLCSHGKLHPDKVGDSKRVSLQAAQLLYE
RYSGGPRLDNSSLCRECVSQRCRVLRLKNQLNEDYKEVSNLVKRTLSGEGYWVGKASLRS
WRQLALEQLEEDEHETKYSNGQTNGQGPHINNSKEFGPELSEGNEDEMKTFNEDIVCSHG
GLSILETERKLVSSEVWTKLRAYFSKAPEFTQNQEPCQQCLTLEQEEKDNEAVSKMMALD
QKNQLLNLFHEKNRPTLTKWPQGTDVLYIVPLFFVDEWRKFIRRPTKSSPVSNVGNTLLL
CPHGGFMFTYDSLINGDAQHIALLWPNEWEVISRLFIVDQPISIHCFKQTTPSGPTTQYT
TQPDLCWECRESFLFQQQRDLREYTQATIYIRKVIEDKRMIKEAAPEMNASSSEAEEEKE
EHLKVDGEKDPDFSQAQSTRTQPWKWLSSKQDTDRPGDALPSESQDGAKRLKLCDNSAAS
AAAVSVTNMTKLGGIRRSTRHRKLRGEKALIVSANQTLKELKIQIMHAFSVAPFDQNLSI
DGKSLTDDSATLGSLGVIPESIICLKADEPIADYAAMDDVYQVRMPEEGFKGTGLLGH
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccgcatacaactggagaaagcggcttggcgttgggtggaaacggtgaaacca
gaagaaatcagacaggagcatattgagctagcatatcgcgtcaatctactggcctgcaag
agaggagcctgcaggaggaactgcaaagggaatcccaactgtcttgtgggtattggtgaa
caggcgtggctgggggagatagatgaaaatgctttccacaatatcgatgacccaaattca
gagcgtcgagacaagaacacatttgttggcctgaccaacctgggtgcaacatgttacgtc
aacacattcctgcaagtgtggttccacaacctggagctgcgtaggagcctttatcagtgc
ctcaattcccgagcacaggaacacaacattgagtctgattacgagcctcagtccatctgt
gagcatctgcagtatctgtttgcactcctgcagaacagcaacagaaagtacatcgatcct
tcagggcttgttaaagcactgggcctggacacaggacagcagcaggatgcccaggagttt
tcaaagcttttcttgtctctactggaggacacgctgtccaagcaaaagaaccctaacctg
cagaatgtcatccagcggcagttctgtggacagttctcctacgttactgtgtgtaacgag
tgtggacgatcatctgctctgccatcccgattctatgagctggagctgaacatccagggc
cacaagaacctcaccgagtgcgtcacagagttcctgaaggaggagaagctggatggggag
aaccgctacttctgtgagagctgtcagagtaaacaaagtgccacccgtaggataaaactg
cacagccttcctccaaccctcaacctgcagctcatgcgctttgtcttcgatagacaaaca
ggccacaagaagaagttgaacacttttatcagttttccagagcagctggacatggggcct
ttcctggaaggaaaaccagaccagaggtgtgtttatgaactgaatgcagtgctcatccat
cggggtatcagtgcttactcaggccactacattgcccacgtgaaggatgctcgtactggc
gactggtacaaattcaatgatgaagaaattgagaaaatggaaggcaagaagctgcagctt
ggaatagaggaggacattgctgagacagtgaagtcccagacacgaaagccaaagtgcagt
aaaggttaccactgctccagaaatgcttacatgctggtgtataaggtccaggaagaggag
agctcagatccctcaaggaccaatgtcgaggtgccagccttccttcagaggttggtggac
caagacaaccataaatttgaggagtggtgtagtgaaatggcagacatgagaaaacagagc
gtggataagggcaaggccaagcatgaggaggtgaaagaactctacaagcttttacccaca
aaagatggcgagccgtatgagtttatccccctggactggctgaagaagtggctggatgac
tccactgccacaaaagaaatcgacaactcccttttcctatgttctcacggcaaactacac
ccagacaaggtgggagattccaagagggtttctctgcaagctgcacagctcctctatgag
cgctacagcggaggaccgagactggacaactcctctttgtgtagggagtgtgttagccag
cgatgcagagtgctgcggctgaagaaccagctcaatgaagactacaaggaagtctccaac
ctggtcaaacgcactctcagtggtgagggctactgggtgggcaaagcatctctgcgtagc
tggaggcagttggctttggaacagctggaggaggatgaacatgaaacgaaatacagcaat
ggccagaccaatggacagggaccacacatcaacaacagcaaagagttcggcccagagctc
tcagagggcaacgaggacgagatgaagactttcaatgaagacattgtctgcagtcatggg
ggtctgagtattctggagactgaacggaagctggtatcctctgaagtttggaccaagcta
agggcatacttctccaaagccccagaattcacccaaaaccaagaaccctgtcagcagtgc
ctgactttagagcaggaggaaaaggacaatgaagcggtcagtaagatgatggcactggac
cagaagaaccagcttctcaacctcttccatgagaagaatcggccaacactcaccaagtgg
cctcagggaacagatgtactttacatagtccctctgttttttgtggatgagtggagaaaa
ttcatcaggaggcccacaaaatcctctccagtgtctaatgtgggcaacactctgctgctc
tgcccccatggaggcttcatgttcacctacgactccctgatcaatggagatgcacaacat
atagctctgctttggcccaacgaatgggaagtgatcagcagactcttcattgtggaccag
ccaatctccatccactgcttcaaacaaaccacaccaagtggtcccaccacccagtacacc
actcagcctgatttatgttgggagtgcagagagagcttccttttccagcagcagagggac
ctcagagaatatacccaagcgaccatctatatccgcaaagtcatcgaagacaagaggatg
ataaaggaggcagctccggagatgaatgccagcagctccgaggcagaggaggagaaagaa
gaacatttgaaggtggatggagagaaagacccagacttcagccaggcacaaagtaccaga
acacagccatggaagtggctgtcaagcaagcaagacacagacagaccaggagatgctctg
cccagcgagtcacaagatggtgcaaagcgactaaagctgtgtgacaacagcgcagcatca
gcagctgctgtttccgtgaccaacatgaccaaattaggtggaatcaggagaagtacccgg
cacagaaaactcagaggagagaaagcactcattgtttcagctaatcagacacttaaagag
ctgaaaatacagattatgcacgccttctctgtggctccttttgaccagaacctttccatt
gatggaaaaagtctgacagacgactcagccacactcggcagtctgggcgtcattccagag
agcatcatctgtctaaaggctgatgagccaatagcagactatgctgcaatggatgatgtc
tatcaggtgagaatgcctgaagagggatttaaaggcactgggcttctcgggcactga
DBGET
integrated database retrieval system
