Xiphias gladius (swordfish): 120783322
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Entry
120783322 CDS
T07311
Symbol
gli1
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein GLI1
KO
K16797
zinc finger protein GLI1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120783322 (gli1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120783322 (gli1)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
120783322 (gli1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
120783322
NCBI-ProteinID:
XP_039972166
LinkDB
All DBs
Position
LG21:12086748..12142121
Genome browser
AA seq
1491 aa
AA seq
DB search
MPVDMQPHQGLYHYETSPSQPSRGLVPSDQSPYSDASSLHAPLLNGPPQDCRAMYNPMTP
SMTHGSGPGQGIGHCMDQYMRPPQAPPPHSMMGHRGMPPTESGNSTPFCNQNNMMSAHHN
FCQVQPGSDQIGSGDGSRFSTPRSMLKLSKKRALSISPLSDASVDLQTVIRTSPNSLVAF
VNSRCNPNGASSYGHLSVSAMSPSLGYSSNINCQSRQQGSMYGGGGGTPLGGHTPGPCQA
SRLPPHNPRLHAPPKHGHLKTEPGLGGVMDGMNVKSLEERSEGDVASPSSTGTQDPLLGL
LDGRDDLDKEDGKPEPEAVYETNCRWESCNKEFDTQDQLVHHINNEHIHGEKKEFVCHWQ
ECSREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVC
EHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHI
TKKHRGDTGPRPPGSAMTPGGQNSELLLEKEETRREDCKLLAPETALKSQPSPGGQSSCS
SERSPLGSANNNDSGVEMNLNAAGSLEDLTALEDGIAGGGGGGEPGSVGGAMGMSAQALK
RLENLKIDKLKQIRRPTPPGRCASNKLPTLPGTGENMGMCAPSPLLSNRRVMELSNHELG
GGTSIGCSTNDRRGSGTSSLSSAYTVSRRSSMVSPYLSSRRSSEVSQMGGTGGGGCHLLG
PEQSGGDPLSPETNRRRAPCPGGGGLPGLPNLTPAQQYSLKAKYAAATGGPPPTPLPNME
QPGNPGRRGGVLSEYQGQPLPPFLQHGGPRRHSANTEYGTGVIYPHQAPGNNSRRASDPV
RSAADPQALTKRFNSLNNVAMLSRRNALQHRGSDTSLARQMYSPRPPSITENVMMEAMGM
EPHLAPIDARDRSMMMPPGERSFMGYQQQHQTVGGVGGGGPLSNQLSPSHDSLGCPEQGY
IQGHYQNQGGEVTSRAGGNPMGQARPIHPEGMSNTLLQQAEYSMSTCQLSPSGAHYPSIG
QGGDAGGPWSDTHSQVQTSSHSLQNQRGMQYSDPTLQSQQTQAHFSNPTGLYNGPDGTHK
LTIKPEQQFHPGMGGRDACQSAKLQQQRMLLQQTQGYPQQTGQVMMRNSNNPSCDFQGQS
QSSYPSRGGLSLGCAGSALSDGQRSETPMMQVKEMMVRNYVQSQQALMWEQQQEQQQQQQ
QTGIKPTSLSDNMDMSGQTAMMQHSPQHQNQNLYSNQPYASYPNQNLVMSPSAHNRGPSS
VTPKDQQLTGLPGSCYGQEMVVPRPPQGQKPLSRQNSLSQVGGGYLGSPPHLSPVHSTSS
PRRVVRLPPVQHPQHPQNEMFAPSNNNNMYYSGQINMDMEKHMDSQNGPCINQQHSMASN
LDSTGGTKSAPMAPYPEXRPVSNALENLDLDNARIDFTSIIDDAESSSFSPVNNPLQGQP
GSSSQASSRLTTPQTSVSLAAGSGLSNMAVGDMTSMLTSLAGENKYLNTLS
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggacatgcagccacaccaggggctgtatcactacgagacctcacccagccaa
ccctccagaggcctagtcccatcagaccagtctccctacagtgatgcgtcttcgctgcat
gccccgctcctcaacggccctccccaggactgccgagctatgtataatcccatgactccc
agtatgactcatggatcaggaccaggacaggggattggccactgcatggatcaatatatg
aggccacctcaggccccaccgccccacagtatgatgggtcacaggggcatgccgcccaca
gaaagtggcaatagcacccccttctgtaaccagaacaacatgatgtccgctcatcataac
ttctgccaggttcagcctggctctgatcagattgggtctggtgatggctccaggttctcc
acacctcgttccatgctgaagctgagtaaaaagagagctctgtccatctctcctctgtct
gatgctagtgtagacctgcagacggtaatccgtacatcacccaactctttggtggccttt
gtcaactctcgctgcaaccccaatggagccagctcctatggccatctctctgtgagcgcc
atgagtccgtccctgggttattccagcaatataaactgccaatccagacaacaaggttcc
atgtatggtggaggcggggggacacctctgggtggacacacaccaggtccctgccaagct
tcccgcttacctccacacaatcctcggctccacgctccacccaagcatggacatctgaaa
acagagccaggtctgggcggtgtgatggatggcatgaatgtgaagagcctggaggagagg
tcggagggagatgtggctagtccttcttccactggcactcaggaccctctcctgggtcta
ctggatggcagagatgacttggacaaagaggatgggaaacctgagccggaggccgtctac
gaaactaactgtcgctgggaaagctgcaacaaggaatttgacacacaagaccagctcgtt
catcacatcaacaatgagcacatccatggagagaagaaggagtttgtgtgtcactggcag
gagtgctctcgagaacagaggcctttcaaagcccagtacatgctggtggttcatatgcgc
agacacacgggagagaagccacacaagtgcacttttgaaggctgtaacaaggcctactct
cgcctggaaaatttgaagacccacctgcgctctcacactggcgagaaaccatacgtgtgt
gaacatgaagggtgcaacaaggccttctccaatgcttcagaccgggcgaagcaccagaac
cgaactcactccaatgagaaaccttatgtatgtaagatccctggctgcactaagcgatac
acagatccgagctctctgcgcaaacatgtgaagacggttcacggccctgaggcccacatc
accaagaagcatcgtggagacacaggccctcgaccccctggctcggctatgacccctgga
ggccagaattctgaactgctgctggagaaagaggagacacgcagggaggactgcaaactg
ctggctcctgagactgctctgaaatcccagccaagtcctggtggtcagtcatcctgcagt
agcgaacgttctccactggggagcgccaacaacaatgacagcggtgtggagatgaaccta
aatgcagcaggcagcttagaggatctcacagcactggaggatggaatagctggtggagga
ggaggaggggagccaggaagtgtaggaggagcaatgggaatgtcagcacaggctttgaag
aggctggagaacctgaagattgacaaactgaagcaaatccgcaggcctacccctcctggc
cgctgtgctagcaacaagctcccaacacttcctggtacaggggagaatatgggaatgtgc
gcaccttctccactcctctcaaatcgtcgtgttatggagctgtctaaccatgagttagga
ggtggaacttcgattggctgctctactaatgacaggagaggaagcggcaccagcagccta
agctctgcatataccgtcagccgtcgctcctccatggtgtctccttacctgtccagccgg
cgctccagtgaggtctcacaaatgggaggaacaggagggggaggatgtcacctccttggc
ccagagcagagtgggggagaccccctctctcctgagaccaatcgcagacgagctccatgt
cctggaggaggaggattgccaggtcttcctaatttaacacccgcccagcaatacagctta
aaggccaaatatgctgcagcaacgggtgggccaccacccactcctttacccaatatggag
cagccaggaaatccaggcagaagaggaggggttttgagtgagtaccaggggcagcctctg
cctcctttccttcaacatggtggtccacgtaggcacagtgcaaacacagagtatggcact
ggtgttatctaccctcaccaggctccaggcaacaacagccggcgagctagtgacccggtt
cgatcggcagcagatccacaagccctcacaaagcgcttcaatagccttaataatgtagcc
atgttgagccggaggaatgcactgcaacaccgtggctctgacaccagtcttgcccgccaa
atgtactcccctcggccgcctagcattacagagaacgtaatgatggaggctatgggtatg
gagccccaccttgcccctattgatgccagggatcgttctatgatgatgccccctggagaa
agaagctttatgggataccagcaacagcatcaaactgttggaggagttggaggtggaggt
cctctttcaaaccaactgtccccgagccatgactccctgggctgtccagaacagggttac
atacaggggcactaccagaaccagggaggggaagtcacttctagggctggtggaaatcca
atgggccaagcaaggcctattcacccagagggcatgtccaatacacttctccagcaagct
gagtacagtatgagcacctgccagctcagtccctcaggtgctcattatccgagcataggc
cagggtggtgacgctgggggcccttggagtgacacacacagccaagtccaaacttccagc
cattctctccaaaaccagcgaggaatgcagtattcagatcccaccctgcagtctcaacag
acacaagcccacttcagcaatccgacaggcctctataacggtcctgatggaacccacaaa
ctcaccatcaagcctgaacagcaattccaccccgggatgggaggccgagatgcctgtcaa
agtgccaagctccaacagcagcgaatgctcctccagcagactcagggttacccacaacag
acaggccaggttatgatgaggaactcaaacaatcccagctgtgactttcaagggcagagc
caaagctcttaccccagtagaggggggttgagtttgggttgcgctggttctgctctttca
gatgggcagaggtcagaaacacccatgatgcaggtgaaggaaatgatggtcaggaactat
gtacagtcgcagcaagcactcatgtgggagcagcaacaagaacagcagcaacagcagcag
cagactggaataaaacctacttctctttctgacaatatggatatgagtggccagaccgcg
atgatgcagcacagtccacagcaccaaaaccagaatctttattccaaccagccctatgct
tcctatcccaaccagaacctggtcatgagcccttcagcccacaaccgaggacccagctcc
gtgacacctaaagaccagcagctgacaggtctcccaggctcatgctatggccaggagatg
gtggtccccaggcctcctcagggacagaaacctctcagccgccagaacagcctgtcacag
gtaggaggaggctacctgggcagcccaccccacctcagccctgtccactctacttccagc
cctagacgagtggtcagattgcctccagtccagcatccacagcacccacaaaatgagatg
tttgctccttccaataacaataacatgtactactcgggtcagatcaacatggatatggag
aaacacatggactcccagaatgggccttgtataaaccagcagcatagtatggcgtccaac
ctggattcaacaggtggcactaagtctgcccccatggctccctatcctgagntccggccc
gtctccaatgccttagaaaacctggacctggacaatgctcgcatagacttcacctccatc
attgatgatgctgagtcttcctcgttcagcccagtcaacaatcccctccagggtcagccg
ggatcttcctcccaggcctcatcacgcctcaccacccctcagacttctgtcagcctagct
gcgggctctggcctgtccaacatggctgtcggtgacatgacgtccatgcttacctcgttg
gctggggaaaataaatacctgaacacactgtcttag
DBGET
integrated database retrieval system
