Xiphias gladius (swordfish): 120783327
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Entry
120783327 CDS
T07311
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a isoform X1
KO
K14966
host cell factor 1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03083
Polycomb repressive complex
xgl04980
Cobalamin transport and metabolism
xgl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120783327 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
120783327 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120783327 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xgl01009
]
120783327 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120783327 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
xgl03029
]
120783327 (hcfc1a)
Protein phosphatases and associated proteins [BR:
xgl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120783327 (hcfc1a)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
120783327 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
120783327 (hcfc1a)
MLL-HCF complex
120783327 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
120783327 (hcfc1a)
Mitochondrial biogenesis [BR:
xgl03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
120783327 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
120783327
NCBI-ProteinID:
XP_039972177
LinkDB
All DBs
Position
LG21:complement(25754192..25767975)
Genome browser
AA seq
1741 aa
AA seq
DB search
MSAPGSAVSGTTASVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
AGSSVVGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPSVSGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDTMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPAMSTTPSQ
PVNSPKSPAPAAAAPSAQSLPQTAVLKVAAQQSATGTSVVTVRPSQPGKSPVTVTSLPPG
VRMVVPAQTTQGSPIGSSPQMSGMAALAAAAAATQKIPPSSAGTVLNVPAGATILKTVAV
SPGTTTVKVASPVMVSNPATRMLKTAAAQVGTATASSPTTTTRPIITVHKSGAVTVAQQA
QVVTTVVGGVTKTITLVKSPLTMGGSGTLISNLGKMMSVVQTKPVQTSAVTGQASTNPLT
QIIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGVSPTTTKQGTTI
IKTIPMSAIMTQPGATGVTSSAGMKTPITILTTKVMTTGTPGKIITAVPKLATAAGQQGL
TQVVLKGAPGQPGTILRTVPMSTVGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVT
GTVSTSLAGGTVDSSNASLVTPITTLGTIATLSSQVISPAAITVSAAQTSLTSASTLPSS
TITVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSTEAGAAGEGSGTVTLVC
SNPPCETHETGTTNTATTSSATIGAGQVCSNPPCETHETGTTNTATTSSANIGAGQVCSN
PPCETHETGTTNTATTSSATIGAGQVCSNPPCETHETGTTNTATTASSNMSALRVCSNPP
CETHETGTTNTATTASANMGGVQQVCSNPPCETHVTGTTNTATQASSNMNAGQTNTVQRV
CSNPPCETHETGTTNTPSTATSSMGGDQTSTGAGLVQRVCSNPPCETHETGTTNTATTAT
CSMETGEGTAAQQTEEGTEGTSSTEVASTTAAAGMVTTTQGRAITTVTQSTPAPGPSVPS
ISSITEGVSTAASSTEEPMQTDEAASAEAAPAEEGATAMETQAEGEAAAATALNLPSELM
SEGQGATLMVTGLSDEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMNEGDSTG
ESQQPTNIPIMLTQQDFAALVQQQQQLQEAQAAAQQATVDTSLPTEGLAPADSLNDPSVE
SNGHNEMAAAVTSAVASLLPRTTAETLAPSSTFAPSVSVASPAKLQAAAALAEVANGIEG
EKQAPQPTPVKPVVKKENQWFDVGIVKVTNMVVTHFYVPGDDSQGDDDSGIMPDYSQMKK
MELQPGTAYKFRVAGINACGRGAFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPP
SVTSGKIIEYSVYLAIQSNQTAEAKASTPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYT
TKPAIIFRIAARNEKGYGPATQVRWLQESGKDAASAKPAPKRPGTSPDTKATGPKKARTD
Q
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctggctccgcggtgtctgggaccacggcgtcggttctgcagccgcggtgg
aaacgggtcctcggatggtccggtcctgttccccggcccaggcatggacacagagctgtg
gctattaaggagctcatggttgtctttggcggtgggaacgaagggattgtggatgaatta
catgtatacaataccgcaacaaaccagtggtttatcccagcggtccgtggggatatcccc
cctggttgtgcagcgtatggttttgtctgtgatggcacaagactgctggtgtttggtgga
atggtggagtatggaaagtacagcaacgatctctatgaactacaggccagcagatgggaa
tggaaaaaactgaaagcaaaaaacccgaagaatgggccccctccttgtcctcgacttggc
cacagtttttccctggttggcaacaaatgctacctgtttggtggattagccaatgacagc
gaggacccaaaaaataacattcccagataccttaatgatttgtacacacttgagcttcgt
gctggttccagtgtggttggatgggatattccaatcacatacggagttctgcctcctccc
cgtgagagccacactgctgtggtttacacagaaaagacgagcaggaaatctcgcctgata
atctatggcgggatgagcggttgtcgtcttggagatctgtggacacttgatattgataca
ctgacatggaacaaaccatcagtaagcggcacagcaccacttcccagaagtcttcactct
gccaccaccatcacaaacaagatgtatgtttttggaggatgggttcctctggtaatggac
gatgtcaaagtggccacacatgagaaggagtggaagtgcacaaacactcttgcctgccta
aatcttgataccatgtgttgggagacggtgttgatggatactcttgaagacaacatccct
agggcccgtgccggccactgtgctgtggccatcaattccagactttatgtttggagtggc
cgtgatggttatcgtaaagcttggaacaaccaagtctgctgtaaagacctctggtacctg
gagacagagcggccacacgctcctgccagggtgcagttagtccgtgccaacacaaactct
ctggaggtgagctggggtgcagtctccactgctgacacctacttactgcagctacagaag
tatgacatccctgcaactccagctgcagcctcaccagccatgagcacaaccccctcacag
cctgtgaactctccaaagagccctgcaccggctgcagcagcaccctctgctcagagcctg
ccacagacagctgttttgaaggttgcagctcagcaatctgccacaggcacatctgttgtc
acagtccgccccagccagcctggaaaatctcctgtcactgtgacgtcccttcctccaggt
gtccgaatggtagtgcctgcccagaccacccaaggatcgccaattggcagtagccctcag
atgagtggcatggcagctttagctgcagcagctgcagcaacacagaagatcccgccctcc
tctgcaggcactgtcctcaatgttcctgcgggtgccaccattcttaaaacagtagccgtt
tctcctggcacaaccactgtgaaagtggcttctccagtcatggtcagtaacccagccacc
cggatgctgaagactgctgcagctcaggtgggcactgcaactgcgtcctctcccaccacc
accaccagacccatcatcactgtgcacaagtctggtgcagtcacggtggcccagcaggcc
caggtggtaaccactgtggtgggaggagtcaccaagaccatcaccctggtcaagagtccc
ctcaccatgggcggcagtggcactctgatctccaaccttggcaagatgatgtctgtggta
caaaccaagccagtgcagacatcagctgtcacaggccaggcttccactaaccctctcaca
cagatcatacagacaaagggtcccctcccagctggcaccatcctgaagctggtgacctct
gcagatggcaagcccacaaccatcatcaccacttcccaggcaggaggcacaggaaacaag
cccactatcctcaacatcagcggcgtctctcctaccaccactaagcaaggcaccaccatt
attaagaccatccccatgtcggccatcatgacccagcctggagccacaggtgtgacaagc
agtgcaggcatgaaaacgcctatcactatccttactacaaaggtgatgaccactggaaca
cctggtaaaatcatcactgcagtgcccaaacttgccactgcagctggccagcaaggattg
acacaggtggttttgaagggtgctcctggacaaccaggaactattttgcgcactgtgccc
atgagcacagtgggtggggttagacttgttacaccagtgacggtgtctgctgttaagccc
actgtcaccacgctggttgtcaaggggactactggtgtcaccactcttggaactgtcact
ggtacagtttctactagcctggcaggaggcacggtggacagttccaatgcctcactggtt
acgcccatcaccacactgggaaccatcgctaccctatccagccaggtcatcagcccagct
gccataactgtgtcagctgctcagaccagcctgacttctgcctccacactgccctcctct
accatcacagtgcagaaccagcccacccaggtgactctaatcacaactcccagtggagta
gaagctcaaccagtacaggatctaccagtgtccatccttgcttcgccaacctctgagcag
cccagttccactgaggcaggagcagcaggagagggttctgggaccgtcactctggtctgc
tctaacccaccctgtgaaacccacgagacaggaaccaccaacacagccaccacctcttct
gccaccatcggagcaggacaggtctgctctaacccaccctgcgagacccacgagaccgga
accaccaacacagccaccacctcatctgctaacattggagcgggacaggtctgctctaac
ccaccctgcgagacccacgagaccggaaccaccaacacagccaccacctcatctgctaca
attggagcagggcaagtctgttctaacccaccatgtgagacccatgaaacaggaacaacc
aacacagccacaactgcatcgtcaaacatgtctgcactccgtgtgtgctccaacccacca
tgtgagacccacgaaactgggacaactaacacagctaccacagcatccgctaacatggga
ggggtacagcaggtgtgctccaacccgccctgtgagacccacgtgacaggcaccaccaac
acagccacccaggcatcgtctaacatgaacgcaggccagacgaacaccgtgcagagggtg
tgctccaacccaccctgcgaaacccacgagacagggaccaccaacaccccgtccacagcc
acctccagcatgggaggtgaccagaccagcacaggagcaggactggtccagagggtgtgc
tccaacccaccctgtgaaacacacgagactgggaccaccaacacagccaccactgccacg
tgcagcatggagacaggcgaaggcacagcagcccagcagacagaggagggaaccgaaggt
accagcagcacagaagttgcctctaccactgcagcagctggcatggtcacaaccacccag
ggcagggccatcacgactgtaactcagtctacaccagctcctggaccctccgtaccttcg
atttcatcaataacagagggcgtgagtactgctgccagctccacagaggaaccaatgcaa
actgatgaggcagcatcagcagaagctgcacccgcagaggagggagctactgctatggag
acacaagcagaaggagaagcggcagcagcaacagcactgaacctgccctcagagctgatg
tctgagggtcagggagccacgctcatggtgacagggctgtcggacgaggagctggctgtg
actgcagcagcagaggctgcagctcaggcagcagccactgaagaagcccaggcccttgct
atccaggctgtcctccaggcggctcagcaagctgtaatgaacgaaggtgattccactgga
gagagccagcaacccaccaacatccccatcatgctgacccagcaggatttcgcagcactg
gtacagcagcagcagcagctgcaagaggctcaggctgcagcccagcaagctaccgtggac
acaagcttgcccactgagggccttgccccagctgacagcctcaacgacccctctgtcgag
agcaacggacacaacgagatggctgccgcagtcaccagtgccgtagcatctttgctgcca
cgtaccactgctgagacactagctccatcaagcaccttcgcaccttctgtatcagtggca
agtccagctaagctgcaagcagcagccgctctagcagaagtcgccaatggcatcgaggga
gagaagcaagcccctcagccaaccccagtgaagcctgtagtaaagaaagagaaccagtgg
tttgatgttggaatcgtaaaagtgacaaatatggttgtcacccacttctatgtgccagga
gatgattctcaaggagatgatgactctggcatcatgccagactacagccagatgaagaaa
atggagttgcagcctggaacagcttataaattccgtgttgctggaatcaacgcttgtggt
cgtggagctttctcagagatatctgctttcaagacttgtctaccaggcttcccaggggca
ccttgcgccatcaaaatcagcaagagcccagatggtgcccacctgacctgggagccaccc
tcggtgacatcagggaagatcatcgaatactcagtgtacctggccatccagagcaaccag
acagctgaagccaaggcctccaccccagcccagctagccttcatgcgcgtgtactgtgga
cccaatccctcatgcttggtacagtcgtccagcctctccaacgcccacatcgactacacc
accaagccagctatcatcttccgcatcgccgcccgcaacgagaagggctacggtcctgcc
acccaagttcgatggctgcaagaatctggcaaagatgctgcctctgcaaagccggccccc
aaaagaccaggcacctctcctgatactaaggctactggtccaaagaaagcaagaacggac
cagtga
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integrated database retrieval system
