KEGG   Xiphias gladius (swordfish): 120783412
Entry
120783412         CDS       T07311                                 
Symbol
yod1
Name
(RefSeq) ubiquitin thioesterase OTU1
  KO
K13719  ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120783412 (yod1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:xgl01002]
    120783412 (yod1)
Peptidases and inhibitors [BR:xgl01002]
 Cysteine peptidases
  Family C88
   120783412 (yod1)
SSDB
Motif
Pfam: zf-C2H2_OTU1_C OTU1_UBXL OTU Ubiquitin_2 ubiquitin UBL_USP40 zf-C2H2_2
Other DBs
NCBI-GeneID: 120783412
NCBI-ProteinID: XP_039972337
LinkDB
Position
LG21
AA seq 301 aa
MLRLRCKTKNGSHIMQGLTHQSCVQELKSKVEELTGIPCDVQKIMVGYPPSSLDLRNGDA
HLKDYPIKSGDTLIVEEEKNKPKPQDHPTVTKAPRLEASPVLARRVVPADNSCLFTSVYY
VVEGGVYDPACAPEMRGLIAQIVSSDPAAYCEAVLGKTNEEYCTWIRRDDTWGGAIEVSI
LSKFYQCEICVVDTQTVRVDRFGEDAGYHKRVLLIYDGIHYDPLQKETPGSDAPPQTIFS
TTDDVILAQALELADEARRKRQFTDVNRFALRCMVCQTGLVGQKEAREHAKETGHTNFGE
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atgttgaggcttcgctgtaagaccaaaaatgggagccacataatgcagggcttgactcac
cagtcctgtgtccaagagctgaagagtaaggtggaggagctgactggtatcccctgtgat
gtgcagaaaattatggttggttacccaccctccagccttgatcttcgaaatggagatgct
cacctcaaggattatcccatcaaatcaggagacacactcattgttgaggaagaaaaaaac
aagccaaaacctcaggatcatcccactgtgactaaagcaccacgcctggaagcctcacct
gtgctggcacgtcgagtggtcccagctgacaactcctgcctcttcaccagtgtgtattat
gtggtggaaggtggtgtatatgaccccgcttgcgctcctgagatgcgaggcctcatagcc
cagattgtttcaagtgaccctgcagcttactgtgaagcggtgctgggaaagaccaacgag
gagtactgcacctggataagacgtgacgacacctggggaggggccatcgaggtgtccatc
ctgtccaaattttaccaatgtgagatctgtgtggtggacactcagacggtccgagtagac
cgatttggggaggacgctggctaccacaaacgtgtgctgctcatctacgacggcatccac
tacgaccctctgcagaaagaaacccccggctctgacgccccaccccagactatcttctcc
accaccgatgacgtaatcctggcccaggcactcgagctggcagacgaggcccgccgcaag
cggcagttcacggacgtaaaccgctttgcattgcgctgcatggtgtgccaaacaggcctg
gtgggacaaaaggaagctcgtgagcatgccaaggagacaggccacaccaattttggggaa
gtgtga

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