Xiphias gladius (swordfish): 120783636
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Entry
120783636 CDS
T07311
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120783636 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120783636 (prpf31)
Spliceosome [BR:
xgl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
120783636 (prpf31)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
120783636
NCBI-ProteinID:
XP_039972667
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Position
LG22:complement(18297016..18303852)
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AA seq
508 aa
AA seq
DB search
MSLADELLADLEEAGDEGEDGLYPEGEEGESDGEATVGRTEGGLEDIPEEMEVDYSKAES
VTSIAKLRNSKQFSEIIDKISGYIGKQRKNSEVSGPVEADPEYRLIVAANNLTVEIDNEL
NIIHKFTRDKYSKRFPELESLVPDSLDYIRTVKELGNNLEKCKNNETLQQILTNATIMVV
SVTASTTQGSMLSEDELKQLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGAST
AAKIMGIAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGFIYHCDVVQSLPPDL
RRKAARLVAAKCTLAARVDSFHESSDGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPL
DGQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNEATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFLKVKKEAKM
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcggacgagctcctggcagacctggaagaggctggagatgagggggaggat
gggctgtatccagagggagaggagggggagagtgatggagaggcaactgtgggaaggaca
gaaggagggctggaagacattccagaggagatggaggtggactacagtaaagctgagagt
gttacgtccatcgccaagctccgcaatagcaaacagttttcagagatcattgacaaaatt
tcaggatatattggaaagcagcgtaagaactcagaggtctcaggtccagttgaagctgat
ccagaatacagactgatcgtagcagccaataacctcacagtagagatcgacaatgagctc
aatatcattcacaagtttaccagggataaatattccaagaggtttccagagctcgagtcg
ctggttcctgattctttagattacattcgcacagtcaaggaactggggaacaatctggag
aaatgcaagaacaatgaaactctgcagcaaatcctcaccaacgccactattatggttgtc
agcgtcacagcctcaaccacacaggggtcaatgctaagtgaagatgaactgaagcaactg
gaggaggcgtgtgatatggccctggagctgaaccagtctaaacacaggatatatgaatac
gtagagtccagaatgtcattcattgccccaaatctgtccatcattgtcggagcgtcaaca
gctgcaaagatcatgggtatcgctggcggcctcactaatctctcaaagatgccggcctgt
aacctgatgctgctgggagctcagaggagaaccctgtccggtttcagcagcacgtcgctg
cttccccacacgggcttcatctaccactgtgatgtggtgcagtcactaccacctgacctc
aggaggaaagcagcccgtctggtggctgcgaagtgcacgctggctgcccgagtggacagc
ttccatgagagttcagatggcaaggttggctacgatctaaaagaagagatagagaggaag
tttgataaatggcaggagcctccaccagtgaagcaggtcaaaccgctgccagccccactg
gatggacagaggaagaagagaggaggaaggaggtatcgaaagatgaaggagcgtcttggg
ctgacggagatcaggaaacacgccaataggatgacctttgcagagattgaagatgatgcg
tatcaagaggatctgggcttcagtctgggtcagctggggaagagcggcagcgggcgcgtc
aggcaggctcaggtcaacgaggccaccaaggccagaatctccaaatccctccagaggacg
ttgcagaagcagagcatgacatacggaggaaagtcgacagtcagagatcgctcttcagga
accagctccagtgtcgcgttcactcctctgcaggggctggagatcgtgaacccacaggct
gcagagaagaaggtggctgaagccaaccagaaatatttctctaatatggcagagttcctc
aaagtcaagaaggaagctaagatgtga
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