Xiphias gladius (swordfish): 120783670
Help
Entry
120783670 CDS
T07311
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120783670 (irx1a)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120783670 (irx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
TSA
Motif
Other DBs
NCBI-GeneID:
120783670
NCBI-ProteinID:
XP_039972729
LinkDB
All DBs
Position
LG22:complement(11652158..11657280)
Genome browser
AA seq
506 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGSERPGVLTPSSRGGSTEIGGSPSATAAAVTSVLGMYASPY
AHNYSAFLPYTSADLALFSQMGSQYELKDSPGVHPASFAAHTSPAFYPYGQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGSRSKEDGEDGNLFGSGDEAEKNEDEEEIDLESIDIDKIDDNDGDQSNEDDDDKSTEG
SRDHRGGVGAGGELDSLEKRRAFALQAHEAFDKSKSTISVHPGSKENSDGNNNNTTRVLS
PDRSGSFPLPSNNKPKIWSLAETATSPDSSSQKPTSPCGPATTTHPSAPHHQIQTHPAFL
PSHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVNQHHHHHHHNHHLPAQQQQQQQQQ
QQQQQPTSVVVSPVAAAAALSNDSKAPPETHSPKHIDHENGLRSDSPPTQTLKSSFRPIH
DRSSLPSSARSPQDATQRVLTALSSA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagctaggctacccgcagtacttaagtgcctcccaggcggtgtatggg
agcgagaggccgggagtgctcacgccttcttcccggggagggagcaccgaaatcggggga
agtccgtccgccaccgcagcagcggtcacgtcggtgttgggcatgtacgccagcccgtac
gcacacaactacagcgctttcttaccgtacaccagcgcggacttggctcttttctcacaa
atgggatcccagtatgagctgaaggacagtcctggcgtccaccctgccagcttcgcagcc
cacacctctccggccttctacccctacggccagtttcagtacggggacccggccaggccc
aagaacgccacccgggagagcaccagcaccctgaaagcctggctcaatgagcacaggaag
aacccgtacccgaccaagggcgagaagatcatgctggccatcatcaccaagatgacgctg
acgcaggtctccacctggttcgccaacgccaggcggaggctcaagaaggagaacaaggtg
acctggggaagcaggagcaaagaggacggggaggacggcaacctgttcggcagtggcgat
gaagcggagaaaaacgaagacgaggaggagattgatttggagagcatagacattgacaaa
atcgacgacaacgacggggatcaaagcaacgaggatgatgacgataagtcaacggagggc
agcagggaccacaggggcggtgtcggtgcgggtggagagctggacagcttggagaaaaga
cgggccttcgccctgcaggcccacgaggcctttgacaaatccaagagcacaatttcagtt
cacccagggagtaaggagaactcggacggcaacaacaacaacaccacaagagttttgtcc
ccggacagatccgggagcttccctctcccgtctaacaataagccgaaaatatggtcttta
gcagagactgctacaagtcccgatagttcatcgcagaaacccacgtccccttgtggccca
gccaccaccactcacccgtcagccccccaccaccagatccaaacccacccggccttcctc
cccagtcacggactgtacacttgccagattggaaagttccacaactggacaaacggggcc
ttcctgggccagaactccctgctgaatgtgaggtcgtttctgggagtaaaccagcaccac
catcaccaccaccacaaccatcacttgccggcccagcagcagcagcagcagcagcagcag
cagcagcagcagcagccgacatcagtggtggtgtcgccggtagcagctgcagcagcgctc
agcaatgacagcaaggccccaccagagacccacagtcccaagcacatagaccatgaaaac
ggtctaaggtctgattcacctccaacacagaccctgaagtcttcctttcgacccatccat
gacagatcctctctgccttccagcgccaggagtccacaagacgccacgcaacgggtcctc
actgctctctcctcggcttga
DBGET
integrated database retrieval system
