Xiphias gladius (swordfish): 120783734
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Entry
120783734 CDS
T07311
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xgl00535
]
120783734 (col14a1a)
Proteoglycans [BR:
xgl00535
]
Extracellular matrix (ECM) proteoglycans
Others
120783734 (col14a1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
VWA_3
Motif
Other DBs
NCBI-GeneID:
120783734
NCBI-ProteinID:
XP_039972834
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Position
LG22:complement(13261731..13393384)
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AA seq
1875 aa
AA seq
DB search
MLSTGQIRWCLWVPLVILALVSNFPSNGQGQVPAPRRLRFKVLSSSKLLVSWKEPKGDFD
SYLFLYNSILGGQQKEIIVSKTDTKVLITDYDPSKDYTVYVIAVSGSEQSRPLQGIHKAE
RGKSDGGDQTEPQRLTDSVAPPEDANEISGVDQFVCHTEAIADILILVDGSWSIGRINFR
LVRMFLENLVNAFDVGRDKTRIGLAQYSGDPRTEWDLNAFSTKDAVIDAVKNLPYKGGNT
LTGLALTYILENCFKPESGSRVGVPKIGILITDGKSQDDVIPPAESLRNAGVELFAIGVK
NADENELRSIASEPDNTHVYNVADFNIMSSIVEGLTRTVCEQVEQQDKDIKEKQIPEKIG
MPLELVTSEVTARSFRVSWSPAPGNVEKYRVVYYPVQGGEPQEAVVDGSETSVVLQHLSS
LTEYQLAVFAVYANEASEALRGSETTLALPTVTGLQLFDVTHSTMKARWDSVDGVSGYML
LYATLTDDGDLDEKEIKVSDAVTELDLEGLIPHTEYTVTVYAMYGEEASDPITNQETTLP
LNPPSNLQFSDITHNSAHISWDPAPRGVKGYRIMWVKTDELVTEEVEVGRVSSYDLNELT
SLKEYSVAIFALYDNGQSEPLTDGFTTTPVPGPLNLRSSDVSTDSFEVSWDHSASDIVLY
RLSWAPFTGGDTNEVVLDGSDNRYILTSLSPSTEYEVMLTAVFKDESESDTISVIETTLA
KTTTIATTTTVARQPVRNLQLSDETTQSLEASWEMEDPHVESYRVSFAGVRGNHEEESVL
VPGDQRRAVLQPLLSDTQYKVTVTPVYTDGQDGISVSSLGTTLPLLSPGNLRVSEEWYNR
FRVTWDPPESPALGYRIVYQPIYVPGQVLETTVGEDLKSMLLRNLLSGTEYSVEVTASYP
TGQSEPQLVNAKTLFLGVSGLSTYQVRSNSMCVQWQPLLHATLYRVSIQSTLNSQRQEVR
LGGGASRQCFYDLTPSSQYQISVHTQMQEMEGPSVSITDMTLPAPTQTPTEPPTTEPPPT
IPPAKEVCKEAKADLAFLVDGSWSIGDDNFMKITRFLYSTMGSLDLIGPDGTQVAIAQFS
DDARTEFQLSSHGNKEALLEAIQRIRYKGGNTKTGRAIKHVKETIFTPEAGARRGIPRVL
VVLTDGRSQDDVNKVSKEMQMEGYIIFAIGFADADYGELVNIASKPSDRHVFFVDDLDAV
KKIEEQLITFVCEAATATCPSVLMSGNTMAGFRMMEKFGLVEKEYSIIPGVSLEPGSFNS
FPCYRLHRDALVSQPTKYLHPEGLPSDYTISMMLRLLPETPEEPFALWEILNKNNKPLVG
VILDNSRKTLTFFNYDYKGDFQTITFEGTEIKKIFHGSFHKLHVTISKTSVKVVLDCTVV
GEKPVHAAGNITTDGVEILGRMFRSRGTHDNSAPFQLQMFDIICSTSWASRDKCCELPAL
RVEEQCPPMPHACTCSQDSKGPPGPSGPPGGPGIRGVRGDRGEPGVTGPQGPMGEIGPPG
PSGPAGPQGPSGLSIQGPMGAAGEKGERGEMGPAGQMGVPGSPGSPGREGPPGARGLLGN
SGPQGRQGPPGPIGAPGAPGAPGPGGPAGSQGDQGLPGPAGTKGDKGERGDVQSQAAVRA
IARQVCEQLIQSHLSRYNSILNQIPVQSAVSVRTVPGPPGEPGRRGSPGPQGEQGPPGRP
GFPGTSGQNGQPGERGLPGEKGERGNPGVGSQGPRGPAGPPGLPGEGRTGSQGPPGRPGN
PGTAGRPGNPGTTGQTGPPGYCDQNSCMGYNVGVQPLPHGGYQPYNQLYNPAAVAYDDDQ
GGEDEEEGEEEQDRDYHRGYPPQYYPQQPSQLAHARHGYRSSPTHSEDVELRSPGVARRF
SRDVVVMEESEEGGL
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaacagggcagatcagatggtgtttgtgggttccactggtgatactggcccta
gtttccaatttccccagtaacggacagggtcaagttccagctccaaggaggctgcgtttc
aaagtgctgagctcaagcaaactccttgtttcatggaaggagcccaaaggagactttgac
agctatctgttcctgtacaacagcatactaggtggtcagcagaaggagatcatagtgtct
aaaacagacactaaggtgctgataacagactacgacccctccaaagactacactgtctat
gtcatcgctgtcagcggcagtgagcagagcagaccacttcagggcattcataaagctgaa
agaggtaagagtgatggaggagaccagactgagccccagaggctgactgattcagttgca
cctccagaggatgccaacgagatctctggagttgatcagtttgtgtgccacactgaagcc
attgcagacatcttgatcctggtggacggctcctggagtattggtcggatcaacttccgg
ttggtccgcatgttcctggaaaacctggtcaatgcctttgatgttggcagagataagaca
aggataggtcttgctcagtacagtggtgatcccaggacagagtgggatctaaatgctttt
tccactaaagatgccgtcatagatgctgtcaagaatctgccctacaaaggaggaaacact
ctcacaggacttgcgttgacttatatcttagagaactgcttcaagcctgagtctggctca
cgggttggcgtgcccaagattgggattctaatcacggatgggaagtcccaggatgatgta
ataccaccagcagagagcctgcgcaatgccggggttgagctgtttgctattggtgtgaag
aatgctgatgagaatgagctgcgctccatcgcctcagagccagacaacactcatgtctac
aatgtagctgacttcaacatcatgagctccatagtagagggtctgaccagaacagtgtgt
gaacaagtggagcagcaagataaagacatcaaggagaaacagataccagagaagattgga
atgccactggagctggtgacgtcagaggtcacggcccggagcttcagggtctcatggagc
ccagcacccggaaatgtagagaaatacagagtggtctattatcctgttcagggaggagaa
ccgcaggaggctgtagtggacggcagtgaaacttcagtggtgttacagcatctcagctct
ctcactgagtaccagctggctgtgtttgctgtgtatgcaaacgaggcaagtgaagctctg
agaggatcagaaacaaccctggcccttcccacagtgacaggccttcagctgtttgatgtg
actcacagcaccatgaaagcaagatgggacagtgtggatggggtctctggctacatgctg
ctgtacgcaactcttacagatgatggagacttggacgagaaggagattaaggtatcggat
gcagtgacagaattggacctggaggggttgatccctcatactgaatacactgtcactgtt
tatgccatgtatggagaggaggccagtgaccctattacaaatcaggaaactacattgcca
ctgaatcctcccagtaacctccagttctctgacatcacccataactccgcccacatcagc
tgggaccccgcgcccagaggagttaaaggttaccgcatcatgtgggtcaagacagacgaa
ctagtcacggaggaggtggaggtcggtcgggtgagctcttatgacctcaatgagttgact
tctctgaaggagtactcagtggccatctttgccttgtatgacaacggccaatcagagccg
ctcactgatggattcactaccactccagttcctggtcctctgaatctacgctccagtgat
gtcagcacagacagctttgaggtcagctgggatcactcagccagtgacattgtcctttac
agactctcttgggcaccgttcacaggtggtgacacaaacgaggtggtcttggatggaagt
gacaacagatacatcctgaccagtctgagtccgtctactgagtatgaagttatgttgacg
gctgtattcaaagatgaatcggagagcgacaccatctccgttatagagacaacattggct
aagacaacaacgattgctaccacaaccacagtggcacgtcaacctgtgagaaaccttcag
ctgagcgacgagaccacccagagcttagaggcatcgtgggagatggaagacccccacgtg
gagagctacagggtctcttttgctggcgtcaggggcaaccacgaagaggagtctgtgtta
gttcctggtgatcagaggagagccgtgcttcagcctttactatcagacacccagtacaaa
gtaacagtcacgccagtatacacagacggacaagatggcatcagtgtctcctccctggga
actacactgcccctcttgtctcctggaaacctccgtgtgtcagaggagtggtacaaccgg
ttcagggtcacctgggatccacctgagtctcctgcattgggttacaggatcgtctaccag
cccatttatgttccaggacaagttttggagacaacagtgggtgaagatttgaagtccatg
ctccttcggaatctgctaagtgggacagaatacagcgttgaagtgacggcttcctatcct
acaggacaaagtgaaccacagctagtcaatgctaaaacattgttccttggcgtctctggc
ttgtcaacctaccaggtgcgttccaacagcatgtgtgtccaatggcagcctcttctacat
gccacattatacagagtatccatacagtctacactcaatagtcaaaggcaggaagtgcgc
ctgggaggcggtgcttcccgacagtgcttctacgacctcacacccagcagccaatatcag
atcagcgttcacacgcagatgcaagaaatggagggaccttcagtctcgatcactgacatg
acattgccagcgcccactcagactccgactgaaccacccaccacagagccccctccgacc
atcccgcctgctaaggaagtgtgcaaggaggccaaggctgacctggctttcctggtcgac
gggtcctggtccatcggagacgacaacttcatgaagatcacacgtttcctctacagcacc
atggggtcgctggatctgattggaccagatggcacccaggtggccattgctcagttcagc
gacgatgctcggacagaattccagttgagttcccatggcaacaaggaagcgctgctggaa
gctattcagaggatcagatacaaaggaggaaacaccaagacaggtcgggccatcaaacat
gtgaaagaaaccattttcactccagaggctggagccagaaggggcattcctagggtcctg
gttgtcctgactgacgggcgttcgcaagatgatgtcaacaaagtgtccaaggagatgcag
atggagggctatatcatctttgccattggctttgcggacgcggactacggagagctggtg
aatattgccagcaagcccagcgatagacacgtcttttttgtggacgatttggatgctgtg
aagaaaatagaggaacaactcattacctttgtctgtgaggctgccactgccacttgtcca
tctgttttgatgagtggtaacacaatggcaggtttccgtatgatggagaagtttggcctg
gtagagaaggagtacagcatcatacctggagtttctctggagccggggtcattcaacagt
ttcccctgttacagattacaccgcgatgccctggtgtcacagcccaccaagtaccttcac
cctgaaggtttaccctctgactacacaatttcaatgatgctccgcctacttccggagacc
ccagaggagccctttgcattgtgggaaatcctcaacaaaaacaacaagccattggtggga
gtaatcctggacaactctcgaaagaccttgacattcttcaactatgactacaaaggagac
ttccagactattacctttgaaggaacagaaatcaaaaagatcttccatggcagcttccac
aagctccatgtaaccatcagtaagacgtctgtgaaagtggtgctcgattgtactgtggtt
ggggagaaacctgtccacgcagctggtaacatcaccaccgacggagtggagatcctcgga
aggatgtttcggtccagaggcactcacgacaactctgctccattccagctccagatgttt
gacatcatctgcagtacatcctgggccagcagagataagtgttgtgagctgccagcattg
agagttgaggagcagtgccctcccatgccgcatgcctgcacctgctcccaggacagcaaa
ggacccccaggaccctccggaccccctggtggtccaggcataaggggagtcagaggagac
agaggagagccaggagtaacgggacctcaagggccaatgggagagattggccctcctgga
ccatcaggaccggctggtcctcagggacccagtggactctccatacaggggcccatgggt
gctgctggagagaagggagagagaggagagatgggaccagccggacaaatgggtgttcct
ggaagccctggctcacctggtagagagggccccccaggagcaaggggtctactggggaat
agcggaccgcagggacgacaaggacctcctggacccattggagccccaggtgcacctgga
gctccaggaccaggtgggccagcagggtcccaaggagatcaaggacttcctggtcctgct
ggtaccaaaggcgataagggagagagaggtgatgtgcaatcccaagctgctgttcgtgcc
atcgcacggcaagtgtgtgaacagctcatccagagccacttgtctcgctataactccata
ctgaaccagatccccgtccagtcggcagtgtcggtccgaacagtacccggcccgcctggg
gagccgggtaggagaggctcccctggacctcagggagagcaaggcccgcccggcagacca
ggcttccctggtaccagtgggcagaatggacaaccaggagaaagaggtctgccaggagag
aagggagagagggggaatccaggggtcgggagtcagggacctcgaggaccagccggacct
ccaggcctgccaggtgaaggtcggacgggcagccagggcccacccggtcggccgggtaac
ccagggacagcagggaggccggggaatccaggtaccaccggacagactggcccgccagga
tactgtgaccagaactcttgtatgggatacaacgtcggagtccaacccctgcctcacggt
ggctaccagccctacaaccagctgtacaaccctgctgcagtggcttacgacgacgaccaa
ggaggtgaagacgaggaggagggagaggaggagcaggaccgcgattaccatcgtggctac
ccccctcagtactatccccaacagccttcccaattggcccacgctcgccacggttaccgc
tcgagccccacccactctgaggatgtggagctgaggtcgccgggtgtcgccaggaggttt
tcacgcgatgtcgttgtcatggaggagagtgaggagggaggactttag
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