Xiphias gladius (swordfish): 120783774
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Entry
120783774 CDS
T07311
Symbol
ddx39ab
Name
(RefSeq) DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120783774 (ddx39ab)
Enzymes [BR:
xgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120783774 (ddx39ab)
Spliceosome [BR:
xgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120783774 (ddx39ab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120783774
NCBI-ProteinID:
XP_039972930
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Position
LG3:6619857..6624862
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AA seq
427 aa
AA seq
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MAENDVDNELLDYEEDEEPQGAPESTAPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAII
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKAAVFFGGLAIKKDEEVLKKNCPHIVVGTPGRILALIR
NKTLSLKNVKHFVLDECDKMLEQLDMRRDVQDIFRITPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCI
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNDVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaatgatgttgataatgaactgcttgattatgaagaagacgaagagccgcaa
ggagcccctgagagcactgcccccgcagggaaaaaggaggtgaagggttcctacgtttcc
atccatagctctggcttcagggatttcctgctcaaaccagagttgctccgtgccatcatt
gactgtggttttgagcatccgtctgaagtccagcacgaatgtatcccacaagctatcctg
ggcatggacatcctgtgccaagccaaatctggtatgggcaaaacagctgtgtttgtgctg
gccacactgcaacagattgaacctgttgatggacaggtgtctgtattagtcatgtgccac
acacgagagctggccttccagatcagtaaagagtatgagcgtttctcgaagtacatgccc
acggtaaaagcagctgtattcttcggtggcctggccatcaagaaggatgaggaggtcttg
aagaagaactgccctcacatcgttgtcggaacaccaggccgcatcctcgctctcatccgg
aacaagaccctcagtctgaagaacgtgaagcattttgttctggatgagtgtgacaaaatg
ttggagcagctagacatgaggcgtgatgtacaggacatcttcaggatcacaccccatgag
aagcaggtcatgatgttcagtgcaactttgagcaaggagatccgaccagtctgccgcaaa
ttcatgcaggatcccatggaagtctttgtggatgacgagaccaaacttacactccacggc
ctgcaacagtactactgcaagctgaaggacagcgagaagaaccgcaagctctttgacctc
ctcgatgttttggagttcaaccaggtggtgatctttgtcaagtcagtccagcgctgcatc
gctctgtcccagcttctggtggaacaaaatttccctgctattgccatccacaggggaatg
gctcaggaggagaggctgtctcgctatcagcaattcaaggacttccaaaggaggatcttg
gtagcaactaaccttttcggccgagggatggacattgagcgagtcaatatcgtcttcaac
tacgacatgccagaagattctgacacctatttgcacagggttgcccgtgctggtaggttt
gggaccaaaggcttggctataacctttgtgtctgacgaaaccgatgccaagactctgaac
gatgtgcaggaccgcttcgaggtcaatgtagccgagctgccggatgagattgacatctcc
tcttacattgaacagtccagatga
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